RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CLIC2O15247 247 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 AKAP3O75969 853 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 KRT9P35527 623 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 GRB14Q14449 540 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 FAM102BQ5T8I3 360 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 ARMCX2Q7L311 632 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 OR8K1Q8NGG5 319 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 ACCSQ96QU6 501 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 DNAJC7Q99615 494 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 GPR20Q99678 358 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 EDEM3Q9BZQ6 932 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 MLXIPQ9HAP2 919 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 AGPAT3Q9NRZ7 376 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 ARMCX3Q9UH62 379 aaPredicted RBP15.43■□□□□ 0.06
CLK3-204ENST00000483723 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
CLK3-204ENST00000483723 LUC7L2Q9Y383 392 aaKnown RBP15.43■□□□□ 0.06
CLK3-204ENST00000483723 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLK3-204ENST00000483723 K7ENM7 598 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 MAPK4P31152 587 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 CASP4P49662 377 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 KLK7P49862 253 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 STAT5BP51692 787 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 PEX3P56589 373 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 MCCD1P59942 119 aaPredicted RBP15.43■□□□□ 0.06
CLK3-204ENST00000483723 FAM160B1Q5W0V3 765 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 RGMBQ6NW40 437 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 TAPT1Q6NXT6 567 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 NYAP1Q6ZVC0 841 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 GPR142Q7Z601 462 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 SAPCD2Q86UD0 394 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 TMTC1Q8IUR5 882 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 FBXO16Q8IX29 292 aaPredicted RBP15.43■□□□□ 0.06
CLK3-204ENST00000483723 TMEM161BQ8NDZ6 487 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 KATNBL1Q9H079 304 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 IKZF4Q9H2S9 585 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 DHX33Q9H6R0 707 aaKnown RBP15.43■□□□□ 0.06
CLK3-204ENST00000483723 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 NRBP2Q9NSY0 501 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 KCNG1Q9UIX4 513 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 PPME1Q9Y570 386 aa15.43■□□□□ 0.06
CLK3-204ENST00000483723 ZNF236Q9UL36 1845 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 CCP110O43303 1012 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
CLK3-204ENST00000483723 PSMC2P35998 433 aaKnown RBP15.42■□□□□ 0.06
CLK3-204ENST00000483723 TCF7P36402 384 aaPredicted RBP15.42■□□□□ 0.06
CLK3-204ENST00000483723 NPTX2P47972 431 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 ZNF157P51786 506 aaPredicted RBP15.42■□□□□ 0.06
CLK3-204ENST00000483723 ZBED6P86452 979 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 TTLL4Q14679 1199 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 PLPPR4Q7Z2D5 763 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
CLK3-204ENST00000483723 PLEKHH3Q7Z736 793 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 SCFD2Q8WU76 684 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 BSNDQ8WZ55 320 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 VTA1Q9NP79 307 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 IVNS1ABPQ9Y6Y0 642 aa15.42■□□□□ 0.06
CLK3-204ENST00000483723 IGF2BP3O00425 579 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLK3-204ENST00000483723 KIF3CO14782 793 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 SMTNP53814 917 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 KCNH2Q12809 1159 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 HSDL1Q3SXM5 330 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 MTERF2Q49AM1 385 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 REXO1L1PQ8IX06 675 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 PDGFCQ9NRA1 345 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 AGPAT5Q9NUQ2 364 aa15.41■□□□□ 0.06
CLK3-204ENST00000483723 SLC15A5A6NIM6 579 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 SLC16A4O15374 487 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 TXNP10599 105 aaKnown RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 TRIM21P19474 475 aaKnown RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 HNRNPH3P31942 346 aaKnown RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 RFC5P40937 340 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 INHBEP58166 350 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 DMP1Q13316 513 aaPredicted RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 MEA1Q16626 185 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 RAD9BQ6WBX8 426 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 DHX37Q8IY37 1157 aaKnown RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 SYCP3Q8IZU3 236 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 PPP1R13BQ96KQ4 1090 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 FAM167AQ96KS9 214 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 TRMT1Q9NXH9 659 aaKnown RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 EMSYQ7Z589 1322 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 SLC10A3P09131 477 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 SCP2P22307 547 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 ARL2P36404 184 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 CDK17Q00537 523 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 EMC2Q15006 297 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 TMEM63BQ5T3F8 832 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 DPY19L2P1Q6NXN4 242 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 WDR59Q6PJI9 974 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 CYP26C1Q6V0L0 522 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 FAM186BQ8IYM0 893 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 CCDC155Q8N6L0 562 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 BBXQ8WY36 941 aaPredicted RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 SLC35C1Q96A29 364 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 KMT5AQ9NQR1 393 aa15.4■□□□□ 0.06
CLK3-204ENST00000483723 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.4■□□□□ 0.06
CLK3-204ENST00000483723 TBX20Q9UMR3 447 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms