RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 RBM8AQ9Y5S9 174 aaKnown RBP4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 TRAF5O00463 557 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 FNTBP49356 437 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 ZNF460Q14592 562 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 SOGA3Q5TF21 947 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 OR5AN1Q8NGI8 311 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 NEU4Q8WWR8 484 aaPredicted RBP4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 CHFRQ96EP1 664 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 MAML3Q96JK9 1138 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 GPHA2Q96T91 129 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 DNAJC2Q99543 621 aaKnown RBP4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 MMRN2Q9H8L6 949 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 CEP72Q9P209 647 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 DENND2AQ9ULE3 1009 aa4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 TNPO3Q9Y5L0 923 aaKnown RBP4.73□□□□□ -1.65
LAPTM4A-202ENST00000483117 UBA6A0AVT1 1052 aaPredicted RBP4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 PTPDC1A2A3K4 754 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 OPA1O60313 960 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 H2AFYO75367 372 aaKnown RBP4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 DNAJC8O75937 253 aaPredicted RBP4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 IGFALSP35858 605 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 BPIFB4P59827 614 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 ADAM8P78325 824 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 ROM1Q03395 351 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 CRHR2Q13324 411 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 RRP1BQ14684 758 aaKnown RBP4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 DGKDQ16760 1214 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 ARHGAP44Q17R89 818 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 SLFN12LQ6IEE8 588 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 GAREM2Q75VX8 874 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 TMPRSS6Q8IU80 811 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 THEMISQ8N1K5 641 aaPredicted RBP4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 ANKRD53Q8N9V6 530 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 GCDHQ92947 438 aaPredicted RBP4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 E2F7Q96AV8 911 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 SLC7A6OSQ96CW6 309 aaPredicted RBP4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 SLC6A15Q9H2J7 730 aa4.72□□□□□ -1.65
LAPTM4A-202ENST00000483117 B4E1Z4 1266 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 PTX3P26022 381 aaPredicted RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 SESN2P58004 480 aaPredicted RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 TCIRG1Q13488 830 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 SQSTM1Q13501 440 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 FNDC3BQ53EP0 1204 aaKnown RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 TTC38Q5R3I4 469 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 PIK3R6Q5UE93 754 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 PRAMEF9Q5VWM5 478 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 Q6ZRM9 215 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 KIAA1958Q8N8K9 716 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 LPPQ93052 612 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 NKD2Q969F2 451 aaPredicted RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 GFM2Q969S9 779 aaKnown RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 C16orf92Q96LL3 132 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 TUBGCP5Q96RT8 1024 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 MPHOSPH9Q99550 1183 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 OSBPL2Q9H1P3 480 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 IKZF4Q9H2S9 585 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 PCIF1Q9H4Z3 704 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 ZNF703Q9H7S9 590 aaPredicted RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 ACSS2Q9NR19 701 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 SLC2A4RGQ9NR83 387 aa4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 AURKAIP1Q9NWT8 199 aaPredicted RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 CDK11AQ9UQ88 783 aaPredicted RBP4.71□□□□□ -1.66
LAPTM4A-202ENST00000483117 GOLGA8BA8MQT2 603 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 H7C1D1 291 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 CYP27B1O15528 508 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 ASLP04424 464 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 SDSP20132 328 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 SCNN1GP51170 649 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 DPTQ07507 201 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 BMS1Q14692 1282 aaKnown RBP4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 SF3A1Q15459 793 aaKnown RBP4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 AMER2Q8N7J2 671 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 ZNF483Q8TF39 744 aaPredicted RBP4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 LARP4BQ92615 738 aaKnown RBP4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 KANSL2Q9H9L4 492 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 CABP5Q9NP86 173 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 KCMF1Q9P0J7 381 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 C11orf21Q9P2W6 132 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 DNAI1Q9UI46 699 aa4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 REXO2Q9Y3B8 237 aaKnown RBP4.7□□□□□ -1.66
LAPTM4A-202ENST00000483117 UBE2QL1A1L167 161 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 PPP1R12AO14974 1030 aaPredicted RBP4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 CYP17A1P05093 508 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 ADH4P08319 380 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 SLC9A1P19634 815 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 SLC25A3Q00325 362 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 MYBPC3Q14896 1274 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 ZNF174Q15697 407 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 ELAVL1Q15717 326 aaKnown RBP4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 FAM111BQ6SJ93 734 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 ZNF627Q7L945 461 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 CLEC14AQ86T13 490 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 ANKRD35Q8N283 1001 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 PLA2G15Q8NCC3 412 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 MIEF2Q96C03 454 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 CLIP3Q96DZ5 547 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 DYDC2Q96IM9 177 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 WDR92Q96MX6 357 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 CEP89Q96ST8 783 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms