RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 LCHNA4D1U4 455 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 ARHGEF15O94989 841 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 FOSL2P15408 326 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 FAM117BQ6P1L5 589 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 CATSPER3Q86XQ3 398 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 NPAS4Q8IUM7 802 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 CRIPAKQ8N1N5 446 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 ZNF579Q8NAF0 562 aaKnown RBP16.87■□□□□ 0.29
COL16A1-213ENST00000482910 PSPC1Q8WXF1 523 aaKnown RBP16.87■□□□□ 0.29
COL16A1-213ENST00000482910 PPP1R16BQ96T49 567 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 YME1L1Q96TA2 773 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 GCOM2Q9BZD3 368 aaPredicted RBP16.87■□□□□ 0.29
COL16A1-213ENST00000482910 INO80BQ9C086 356 aaPredicted RBP16.87■□□□□ 0.29
COL16A1-213ENST00000482910 PRDM12Q9H4Q4 367 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 RGS18Q9NS28 235 aa16.87■□□□□ 0.29
COL16A1-213ENST00000482910 CHD7Q9P2D1 2997 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 LINC01553A4QN01 128 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 RBAK-RBAKDNI3L0D1 243 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 ASAP2O43150 1006 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 DGAT1O75907 488 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 UPP2O95045 317 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 STAG3L1P0CL83 205 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
COL16A1-213ENST00000482910 RARRES1P49788 294 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 ERVK-21P61565 698 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 ATP2C1P98194 919 aaPredicted RBP16.86■□□□□ 0.29
COL16A1-213ENST00000482910 DSC3Q14574 896 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 EMC2Q15006 297 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 NLRP7Q8WX94 980 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 SCLT1Q96NL6 688 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 SAMD11Q96NU1 681 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 NACC1Q96RE7 527 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 TGS1Q96RS0 853 aaKnown RBP16.86■□□□□ 0.29
COL16A1-213ENST00000482910 MTRQ99707 1265 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 RC3H2Q9HBD1 1191 aaKnown RBP16.86■□□□□ 0.29
COL16A1-213ENST00000482910 DBR1Q9UK59 544 aaKnown RBP16.86■□□□□ 0.29
COL16A1-213ENST00000482910 COL6A3P12111 3177 aa16.86■□□□□ 0.29
COL16A1-213ENST00000482910 ZBTB39O15060 712 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 MED24O75448 989 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 POU3F3P20264 500 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-213ENST00000482910 ARL6IP4Q66PJ3 421 aaKnown RBP16.85■□□□□ 0.29
COL16A1-213ENST00000482910 SLC24A5Q71RS6 500 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 RHPN2Q8IUC4 686 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 ZNF689Q96CS4 500 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-213ENST00000482910 ADAM2Q99965 735 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 LRWD1Q9UFC0 647 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 COL4A3BPQ9Y5P4 624 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 A0A0C4DFX4 3053 aa16.85■□□□□ 0.29
COL16A1-213ENST00000482910 RALGAPA2Q2PPJ7 1873 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 A0A087WZ62 844 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 DENND3A2RUS2 1198 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 C9IYK1 514 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 MGEA5O60502 916 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 DGKIO75912 1065 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 BMP15O95972 392 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 FAM189BP81408 668 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 MXD4Q14582 209 aaPredicted RBP16.84■□□□□ 0.29
COL16A1-213ENST00000482910 DTHD1Q6ZMT9 781 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 FERMT3Q86UX7 667 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 PIGOQ8TEQ8 1089 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
COL16A1-213ENST00000482910 FDXACB1Q9BRP7 624 aaPredicted RBP16.84■□□□□ 0.29
COL16A1-213ENST00000482910 ELAC1Q9H777 363 aaKnown RBP16.84■□□□□ 0.29
COL16A1-213ENST00000482910 ATP6V0A4Q9HBG4 840 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 XPNPEP1Q9NQW7 623 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 CHST12Q9NRB3 414 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 ADGRA3Q8IWK6 1321 aa16.84■□□□□ 0.29
COL16A1-213ENST00000482910 ZSCAN20P17040 1043 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-213ENST00000482910 SYT1P21579 422 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.28
COL16A1-213ENST00000482910 LAMTOR4Q0VGL1 99 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 SRGAP1Q7Z6B7 1085 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 NLRC5Q86WI3 1866 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 HSCBQ8IWL3 235 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 CMTR2Q8IYT2 770 aaKnown RBP16.83■□□□□ 0.28
COL16A1-213ENST00000482910 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 MAFAQ8NHW3 353 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-213ENST00000482910 PRPF31Q8WWY3 499 aaKnown RBP16.83■□□□□ 0.28
COL16A1-213ENST00000482910 ARNTL2Q8WYA1 636 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 TMEM143Q96AN5 459 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 NLRP4Q96MN2 994 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 IFT122Q9HBG6 1241 aa16.83■□□□□ 0.28
COL16A1-213ENST00000482910 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
COL16A1-213ENST00000482910 PDIA4P13667 645 aaKnown RBP16.82■□□□□ 0.28
COL16A1-213ENST00000482910 CCT6AP40227 531 aaKnown RBP16.82■□□□□ 0.28
COL16A1-213ENST00000482910 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL16A1-213ENST00000482910 IL17AQ16552 155 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 POTEGQ6S5H5 508 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 IFNLR1Q8IU57 520 aaPredicted RBP16.82■□□□□ 0.28
COL16A1-213ENST00000482910 KSR1Q8IVT5 923 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 FIBCD1Q8N539 461 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 MCPH1Q8NEM0 835 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 CLP1Q92989 425 aaKnown RBP16.82■□□□□ 0.28
COL16A1-213ENST00000482910 ZNF668Q96K58 619 aaPredicted RBP16.82■□□□□ 0.28
COL16A1-213ENST00000482910 TRAIPQ9BWF2 469 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 DACT1Q9NYF0 836 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms