RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RAPGEF1Q13905 1077 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 NFIXQ14938 502 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 DALRD3Q5D0E6 543 aaKnown RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 DNTTIP2Q5QJE6 756 aaKnown RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 TMTC3Q6ZXV5 915 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 CCNJLQ8IV13 435 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 DHX40Q8IX18 779 aaKnown RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 MLKLQ8NB16 471 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 CNNM3Q8NE01 707 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 FLAD1Q8NFF5 587 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 MAP7D2Q96T17 732 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 TCF12Q99081 682 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 NOC4LQ9BVI4 516 aaKnown RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 PBX4Q9BYU1 374 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 MAP3K20Q9NYL2 800 aaKnown RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 SCINQ9Y6U3 715 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 LAMB1P07942 1786 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 TSPY2A6NKD2 308 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 BTBD18B2RXH4 712 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 PDE2AO00408 941 aaPredicted RBP8.67□□□□□ -1.02
SNX13-208ENST00000482558 RXRAP19793 462 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 KCNJ6P48051 423 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 AFF2P51816 1311 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 DYNLL1P63167 89 aaKnown RBP8.67□□□□□ -1.02
SNX13-208ENST00000482558 JAG1P78504 1218 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 DDR2Q16832 855 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 NT5DC1Q5TFE4 455 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 C12orf60Q5U649 245 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 CEP135Q66GS9 1140 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 ZNF280DQ6N043 979 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 SHC4Q6S5L8 630 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 DTHD1Q6ZMT9 781 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 DDX42Q86XP3 938 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNX13-208ENST00000482558 RAB11FIP4Q86YS3 637 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 CCDC144CPQ8IYA2 1237 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 ZNF444Q8N0Y2 327 aaPredicted RBP8.67□□□□□ -1.02
SNX13-208ENST00000482558 CNPY4Q8N129 248 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 MYO1HQ8N1T3 1032 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 TMEM102Q8N9M5 508 aaPredicted RBP8.67□□□□□ -1.02
SNX13-208ENST00000482558 CCDC150Q8NCX0 1101 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 CCDC148Q8NFR7 591 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 ASAP3Q8TDY4 903 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 CCDC12Q8WUD4 166 aaPredicted RBP8.67□□□□□ -1.02
SNX13-208ENST00000482558 HHIPQ96QV1 700 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 MYL10Q9BUA6 226 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 GTPBP4Q9BZE4 634 aaKnown RBP8.67□□□□□ -1.02
SNX13-208ENST00000482558 BHLHE41Q9C0J9 482 aaPredicted RBP8.67□□□□□ -1.02
SNX13-208ENST00000482558 KAT14Q9H8E8 782 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 CHST12Q9NRB3 414 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 KCND1Q9NSA2 647 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
SNX13-208ENST00000482558 AATFQ9NY61 560 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNX13-208ENST00000482558 MROH7-TTC4A0A0A0MT08 1334 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 hCG_1984214I3L0E3 225 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 LAD1O00515 517 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 SMAD7O15105 426 aaKnown RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 AP5Z1O43299 807 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 SCGB1D2O95969 90 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 SERPINB2P05120 415 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 SCG2P13521 617 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 MARCKSP29966 332 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 MYL5Q02045 173 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 ORC2Q13416 577 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 PFKFB3Q16875 520 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 ARL6IP4Q66PJ3 421 aaKnown RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 PRR5LQ6MZQ0 368 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 TXNDC11Q6PKC3 985 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 BEND4Q6ZU67 534 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 C11orf57Q6ZUT1 292 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 CCDC186Q7Z3E2 898 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 RELL1Q8IUW5 271 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 SP8Q8IXZ3 490 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 ZNF713Q8N859 430 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 ZNF384Q8TF68 577 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 WNT8BQ93098 351 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 EAF1Q96JC9 268 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 AIFM3Q96NN9 605 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 LACRTQ9GZZ8 138 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 OSBPL5Q9H0X9 879 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 TTC12Q9H892 705 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 MKNK2Q9HBH9 465 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 INCENPQ9NQS7 918 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 TFCP2L1Q9NZI6 479 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 FBXO2Q9UK22 296 aaPredicted RBP8.66□□□□□ -1.02
SNX13-208ENST00000482558 TACC3Q9Y6A5 838 aa8.66□□□□□ -1.02
SNX13-208ENST00000482558 FAM205AQ6ZU69 1335 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 MYH6P13533 1939 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 GPR75-ASB3A0A0A6YYF3 556 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 NFKBIEO00221 500 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 SART1O43290 800 aaKnown RBP8.65□□□□□ -1.02
SNX13-208ENST00000482558 ASMTLO95671 621 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 BMP3P12645 472 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 GYS1P13807 737 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 POU3F3P20264 500 aaPredicted RBP8.65□□□□□ -1.02
SNX13-208ENST00000482558 PRDX5P30044 214 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms