RNA–Protein interactions for RNA: ENST00000482527.1

ABCB1-205, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 4

Gene ABCB1, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-205ENST00000482527 CALCOCO2Q13137 446 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 ACVR2BQ13705 512 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 SETDB1Q15047 1291 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 E2F5Q15329 346 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 LRRC41Q15345 812 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 PARP6Q2NL67 630 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 GPATCH4Q5T3I0 446 aaKnown RBP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 C15orf52Q6ZUT6 534 aaKnown RBP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 PNMA8AQ86V59 439 aaPredicted RBP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 DDX42Q86XP3 938 aaKnown RBP eCLIP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 LMNTD2Q8IXW0 634 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 LRRC34Q8IZ02 419 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 AGGF1Q8N302 714 aaeCLIP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 OR2W6PQ8NHA6 318 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 FBF1Q8TES7 1133 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 ZNF384Q8TF68 577 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 U2AF1L4Q8WU68 220 aaKnown RBP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 NSMCE1Q8WV22 266 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 HPS3Q969F9 1004 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 KLHL29Q96CT2 875 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 FAXDC2Q96IV6 333 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 SLC4A9Q96Q91 983 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 PIGSQ96S52 555 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 ELAC2Q9BQ52 826 aaKnown RBP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 PACSIN1Q9BY11 444 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 NEUROG2Q9H2A3 272 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 PPCSQ9HAB8 311 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 ARHGEF3Q9NR81 526 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 WHRNQ9P202 907 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 KLHL14Q9P2G3 628 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 PNMA2Q9UL42 364 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 PACSIN2Q9UNF0 486 aaPredicted RBP10.35□□□□□ -0.75
ABCB1-205ENST00000482527 MYH10P35580 1976 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 SHANK3Q9BYB0 1731 aa10.35□□□□□ -0.75
ABCB1-205ENST00000482527 MAST2Q6P0Q8 1798 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 CICQ96RK0 1608 aaPredicted RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 USP17L3A6NCW0 530 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 USP17L4A6NCW7 530 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 KIAA0391O15091 583 aaKnown RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 DDX3YO15523 660 aaKnown RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 HIP1RO75146 1068 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 BCRP11274 1271 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 ATP2A2P16615 1042 aaKnown RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 CYP11B2P19099 503 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 MUTP22033 750 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 CTNNA2P26232 953 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 ALDH3A1P30838 453 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 CDK8P49336 464 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 SLC18A1P54219 525 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 SARNPP82979 210 aaKnown RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 ATP2B2Q01814 1243 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 TRAF1Q13077 416 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 TRADDQ15628 312 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 CNGA2Q16280 664 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 CYP1B1Q16678 543 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 CAPRIN2Q6IMN6 1127 aaKnown RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 DPY19L2P1Q6NXN4 242 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 EPM2AIP1Q7L775 607 aaPredicted RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 USP17L1Q7RTZ2 530 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 TMC4Q7Z404 712 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 APBB1IPQ7Z5R6 666 aaPredicted RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 TBC1D1Q86TI0 1168 aaPredicted RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 JAMLQ86YT9 394 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 RIBC1Q8N443 379 aaPredicted RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 SYT2Q8N9I0 419 aaPredicted RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 SLC35G2Q8TBE7 412 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 TBC1D16Q8TBP0 767 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 ATP8B4Q8TF62 1192 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 SLCO2A1Q92959 643 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 TBC1D31Q96DN5 1066 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 FAM20AQ96MK3 541 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 MBOAT7Q96N66 472 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 TMEM237Q96Q45 408 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 DPH5Q9H2P9 285 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 ECT2Q9H8V3 914 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 SEL1LQ9UBV2 794 aa10.34□□□□□ -0.75
ABCB1-205ENST00000482527 XIRP1Q702N8 1843 aaKnown RBP10.34□□□□□ -0.75
ABCB1-205ENST00000482527 MYO3BQ8WXR4 1341 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 TLDC2A0PJX2 215 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 DDX3XO00571 662 aaKnown RBP eCLIP10.33□□□□□ -0.76
ABCB1-205ENST00000482527 P4HA2O15460 535 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 RIPK2O43353 540 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 ATP2C2O75185 946 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 MTA2O94776 668 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 EYA4O95677 639 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 TTLL1O95922 423 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 OAS1P00973 400 aaKnown RBP10.33□□□□□ -0.76
ABCB1-205ENST00000482527 FOSP01100 380 aaPredicted RBP10.33□□□□□ -0.76
ABCB1-205ENST00000482527 NR3C1P04150 777 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 SLC9A1P19634 815 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 PTGIRP43119 386 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
ABCB1-205ENST00000482527 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
ABCB1-205ENST00000482527 PLTPP55058 493 aa10.33□□□□□ -0.76
ABCB1-205ENST00000482527 MRPS35P82673 323 aaKnown RBP10.33□□□□□ -0.76
ABCB1-205ENST00000482527 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
ABCB1-205ENST00000482527 MYO1EQ12965 1108 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms