RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PLXNA4Q9HCM2 1894 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 NCOR1O75376 2440 aa11.76□□□□□ -0.53
CPSF4-212ENST00000482251 ARID2Q68CP9 1835 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 C9IYK1 514 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 MMP1P03956 469 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 ITGB1P05556 798 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 EIF4BP23588 611 aaKnown RBP11.75□□□□□ -0.53
CPSF4-212ENST00000482251 NPEPPSP55786 919 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 PSMC5P62195 406 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 TRIM29Q14134 588 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 CTTNQ14247 550 aaKnown RBP11.75□□□□□ -0.53
CPSF4-212ENST00000482251 C8orf34Q49A92 452 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 SLC24A5Q71RS6 500 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 ANO5Q75V66 913 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 RHPN2Q8IUC4 686 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 KSR1Q8IVT5 923 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
CPSF4-212ENST00000482251 KLHL23Q8NBE8 558 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 NLRP4Q96MN2 994 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 CEP89Q96ST8 783 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 LXNQ9BS40 222 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 CLDND1Q9NY35 253 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 RGL1Q9NZL6 768 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 PCDHGC5Q9Y5F6 944 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 MYO7AQ13402 2215 aa11.75□□□□□ -0.53
CPSF4-212ENST00000482251 A0A087WZ62 844 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 RB1P06400 928 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 DARSP14868 501 aaKnown RBP11.74□□□□□ -0.53
CPSF4-212ENST00000482251 IL9P15248 144 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 DNAJB1P25685 340 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 GTF2F1P35269 517 aaKnown RBP eCLIP11.74□□□□□ -0.53
CPSF4-212ENST00000482251 IRS1P35568 1242 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 PBX3P40426 434 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
CPSF4-212ENST00000482251 DSC3Q14574 896 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 CLUL1Q15846 466 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 FAM20AQ96MK3 541 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 FDXACB1Q9BRP7 624 aaPredicted RBP11.74□□□□□ -0.53
CPSF4-212ENST00000482251 NIFKQ9BYG3 293 aaKnown RBP11.74□□□□□ -0.53
CPSF4-212ENST00000482251 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 CYP26B1Q9NR63 512 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 SUCLA2Q9P2R7 463 aaPredicted RBP11.74□□□□□ -0.53
CPSF4-212ENST00000482251 PLAGL2Q9UPG8 496 aa11.74□□□□□ -0.53
CPSF4-212ENST00000482251 ZBTB39O15060 712 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 TBX3O15119 743 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 NEMFO60524 1076 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 MAFO75444 373 aaPredicted RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 ZSCAN20P17040 1043 aaPredicted RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 DNM2P50570 870 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 POLGP54098 1239 aaPredicted RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 SPIRE1Q08AE8 756 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 HYAL1Q12794 435 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 CAMK1Q14012 370 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 CALCRLQ16602 461 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 LONRF3Q496Y0 759 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 ADGRD2Q7Z7M1 963 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 POF1BQ8WVV4 589 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 TMEM143Q96AN5 459 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 PLVAPQ9BX97 442 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 LMAN2LQ9H0V9 348 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 RNF19AQ9NV58 838 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 TMEM161AQ9NX61 479 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 LIMCH1Q9UPQ0 1083 aa11.73□□□□□ -0.53
CPSF4-212ENST00000482251 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
CPSF4-212ENST00000482251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 IGKV6-21A0A0C4DH24 114 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 POTEMA6NI47 508 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 LINC01565O15544 149 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 P4HBP07237 508 aaKnown RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 YWHABP31946 246 aaKnown RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 TXKP42681 527 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 DLX2Q07687 328 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 EMC2Q15006 297 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 EPHA7Q15375 998 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 LEXMQ3ZCV2 418 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 PTCRAQ6ISU1 281 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 ECHDC2Q86YB7 292 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 TPH2Q8IWU9 490 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 SLFN12Q8IYM2 578 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 THNSL1Q8IYQ7 743 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 ABI1Q8IZP0 508 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 COLGALT1Q8NBJ5 622 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 SPPL3Q8TCT6 385 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 P2RX5Q93086 422 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 PABPC5Q96DU9 382 aaKnown RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 KIF2CQ99661 725 aa11.72□□□□□ -0.53
CPSF4-212ENST00000482251 GCOM2Q9BZD3 368 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-212ENST00000482251 A0A087WWV3 80 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms