RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 CRIPAKQ8N1N5 446 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 ATP8B4Q8TF62 1192 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 TMEM40Q8WWA1 233 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 NLRP7Q8WX94 980 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 ANO2Q9NQ90 1003 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 TYW1Q9NV66 732 aaKnown RBP11.72□□□□□ -0.53
DDX39B-220ENST00000482195 FAM86C1Q9NVL1 165 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
DDX39B-220ENST00000482195 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 MYO10Q9HD67 2058 aa11.72□□□□□ -0.53
DDX39B-220ENST00000482195 CACNA1HO95180 2353 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 SMCO2A6NFE2 343 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 CCNE2O96020 404 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 FOSP01100 380 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-220ENST00000482195 VTNP04004 478 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 ERVFC1P60507 584 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 IRX6P78412 446 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-220ENST00000482195 SIGLEC14Q08ET2 396 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 CBX2Q14781 532 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-220ENST00000482195 PKN1Q16512 942 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 RTN1Q16799 776 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 DUSP6Q16828 381 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 FAM228AQ86W67 206 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 PLA2G4DQ86XP0 818 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 ABI1Q8IZP0 508 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 FBXL6Q8N531 539 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 RNF169Q8NCN4 708 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 VN1R2Q8NFZ6 395 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 SCLT1Q96NL6 688 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 CDCA3Q99618 268 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-220ENST00000482195 PRRX2Q99811 253 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 TCF25Q9BQ70 676 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 LSG1Q9H089 658 aaKnown RBP11.71□□□□□ -0.53
DDX39B-220ENST00000482195 RGS18Q9NS28 235 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 AKT3Q9Y243 479 aa11.71□□□□□ -0.53
DDX39B-220ENST00000482195 ATF7P17544 494 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-220ENST00000482195 SREBF1P36956 1147 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 PBX3P40426 434 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 VCPP55072 806 aaKnown RBP11.7□□□□□ -0.54
DDX39B-220ENST00000482195 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 ZNF484Q5JVG2 852 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 JAKMIP3Q5VZ66 844 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 SWSAP1Q6NVH7 229 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 ABHD15Q6UXT9 468 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 BMP8AQ7Z5Y6 402 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 KIAA0319LQ8IZA0 1049 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 LRRC43Q8N309 656 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 TCEANC2Q96MN5 208 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 MAP7D2Q96T17 732 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
DDX39B-220ENST00000482195 SAMM50Q9Y512 469 aa11.7□□□□□ -0.54
DDX39B-220ENST00000482195 USP34Q70CQ2 3546 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 C9IYK1 514 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 MEIS1O00470 390 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 FSCN2O14926 492 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ZBTB43O43298 467 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 HOXA2O43364 376 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ATG7O95352 703 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 C22orf31O95567 290 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 CLCN3P51790 818 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 CRYBB1P53674 252 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-220ENST00000482195 PRSS12P56730 875 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 TCF15Q12870 199 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 PTPN21Q16825 1174 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 PDE12Q6L8Q7 609 aaKnown RBP11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ANKRD54Q6NXT1 300 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 SGMS1Q86VZ5 419 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-220ENST00000482195 SUSD6Q92537 303 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ATOH1Q92858 354 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ZNF558Q96NG5 402 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 ZNF577Q9BSK1 485 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 TMEM117Q9H0C3 514 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 GLT8D2Q9H1C3 349 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 CWH43Q9H720 699 aa11.69□□□□□ -0.54
DDX39B-220ENST00000482195 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-220ENST00000482195 IGKV6D-21A0A0A0MT36 114 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 HIDE1A8MVS5 230 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 FAM86B1E9PN63 330 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 IPO5O00410 1097 aaKnown RBP11.68□□□□□ -0.54
DDX39B-220ENST00000482195 GFRA3O60609 400 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 PSAPP07602 524 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 FAM86B2P0C5J1 330 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
DDX39B-220ENST00000482195 PPM1AP35813 382 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 FGD1P98174 961 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 SETQ01105 290 aaPredicted RBP11.68□□□□□ -0.54
DDX39B-220ENST00000482195 KRT17Q04695 432 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms