RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 DDX11L8A8MPP1 907 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 LARGE1O95461 756 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 EIF4BP23588 611 aaKnown RBP20.88■□□□□ 0.93
CLK1-211ENST00000481641 CTC1Q2NKJ3 1217 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 NAALADL2Q58DX5 795 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 XKR3Q5GH77 459 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 EARS2Q5JPH6 523 aaKnown RBP20.88■□□□□ 0.93
CLK1-211ENST00000481641 PIK3AP1Q6ZUJ8 805 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 FAM177A1Q8N128 213 aaPredicted RBP20.88■□□□□ 0.93
CLK1-211ENST00000481641 SCLT1Q96NL6 688 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 NIFKQ9BYG3 293 aaKnown RBP20.88■□□□□ 0.93
CLK1-211ENST00000481641 TYW1Q9NV66 732 aaKnown RBP20.88■□□□□ 0.93
CLK1-211ENST00000481641 TMEM161AQ9NX61 479 aa20.88■□□□□ 0.93
CLK1-211ENST00000481641 ORC3Q9UBD5 711 aaPredicted RBP20.88■□□□□ 0.93
CLK1-211ENST00000481641 FAM205CA6NFA0 338 aa20.87■□□□□ 0.93
CLK1-211ENST00000481641 DARSP14868 501 aaKnown RBP20.87■□□□□ 0.93
CLK1-211ENST00000481641 ANAPC15P60006 121 aa20.87■□□□□ 0.93
CLK1-211ENST00000481641 NEK8Q86SG6 692 aa20.87■□□□□ 0.93
CLK1-211ENST00000481641 GJD3Q8N144 294 aa20.87■□□□□ 0.93
CLK1-211ENST00000481641 NLRP7Q8WX94 980 aa20.87■□□□□ 0.93
CLK1-211ENST00000481641 RNF19AQ9NV58 838 aa20.87■□□□□ 0.93
CLK1-211ENST00000481641 CCNT1O60563 726 aaKnown RBP20.86■□□□□ 0.93
CLK1-211ENST00000481641 TBX10O75333 385 aa20.86■□□□□ 0.93
CLK1-211ENST00000481641 FDPSP14324 419 aaKnown RBP20.86■□□□□ 0.93
CLK1-211ENST00000481641 SSTR3P32745 418 aaPredicted RBP20.86■□□□□ 0.93
CLK1-211ENST00000481641 PUS10Q3MIT2 529 aaKnown RBP20.86■□□□□ 0.93
CLK1-211ENST00000481641 PLA2G4FQ68DD2 849 aa20.86■□□□□ 0.93
CLK1-211ENST00000481641 RBM23Q86U06 439 aaKnown RBP20.86■□□□□ 0.93
CLK1-211ENST00000481641 CWH43Q9H720 699 aa20.86■□□□□ 0.93
CLK1-211ENST00000481641 VAV3Q9UKW4 847 aa20.86■□□□□ 0.93
CLK1-211ENST00000481641 NCK2O43639 380 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 ZSCAN20P17040 1043 aaPredicted RBP20.85■□□□□ 0.93
CLK1-211ENST00000481641 XBP1P17861 261 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 ME3Q16798 604 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 LRRC55Q6ZSA7 311 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 FAM43BQ6ZT52 329 aaPredicted RBP20.85■□□□□ 0.93
CLK1-211ENST00000481641 ANO5Q75V66 913 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 ECHDC2Q86YB7 292 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 COLGALT1Q8NBJ5 622 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 RNF169Q8NCN4 708 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 CASD1Q96PB1 797 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 C1QTNF1Q9BXJ1 281 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 ELAC1Q9H777 363 aaKnown RBP20.85■□□□□ 0.93
CLK1-211ENST00000481641 KCNMB3Q9NPA1 279 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 RNF216Q9NWF9 866 aaPredicted RBP20.85■□□□□ 0.93
CLK1-211ENST00000481641 PCDHB12Q9Y5F1 795 aa20.85■□□□□ 0.93
CLK1-211ENST00000481641 C5orf42Q9H799 3197 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 A0A087WZ62 844 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 IGKV6-21A0A0C4DH24 114 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 NRIP1P48552 1158 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 FOSBP53539 338 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 PSMC5P62195 406 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 NR5A1Q13285 461 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 ADAM15Q13444 863 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 ANKRD1Q15327 319 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 PPP4R3AQ6IN85 833 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 KSR1Q8IVT5 923 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 ZNF579Q8NAF0 562 aaKnown RBP20.84■□□□□ 0.93
CLK1-211ENST00000481641 HAS1Q92839 578 aa20.84■□□□□ 0.93
CLK1-211ENST00000481641 FDXACB1Q9BRP7 624 aaPredicted RBP20.84■□□□□ 0.93
CLK1-211ENST00000481641 WRAP73Q9P2S5 460 aaPredicted RBP20.84■□□□□ 0.93
CLK1-211ENST00000481641 FAM86C2PA6NEL3 165 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 FGF18O76093 207 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 SEC24BO95487 1268 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 NPEPPSP55786 919 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 PPP2R5CQ13362 524 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 RHPN2Q8IUC4 686 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 THNSL1Q8IYQ7 743 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 ZNF710Q8N1W2 664 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 MICAL1Q8TDZ2 1067 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 FAM20AQ96MK3 541 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 GCOM2Q9BZD3 368 aaPredicted RBP20.83■□□□□ 0.93
CLK1-211ENST00000481641 TMEM117Q9H0C3 514 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 AAASQ9NRG9 546 aa20.83■□□□□ 0.93
CLK1-211ENST00000481641 SUCLA2Q9P2R7 463 aaPredicted RBP20.83■□□□□ 0.93
CLK1-211ENST00000481641 PER2O15055 1255 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 MBTPS2O43462 519 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 JAK2O60674 1132 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 MAFO75444 373 aaPredicted RBP20.82■□□□□ 0.92
CLK1-211ENST00000481641 GCFC2P16383 781 aaKnown RBP20.82■□□□□ 0.92
CLK1-211ENST00000481641 PBX3P40426 434 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 QARSP47897 775 aaKnown RBP20.82■□□□□ 0.92
CLK1-211ENST00000481641 NDUFV1P49821 464 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 ERVFC1P60507 584 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 CLLU1OSQ5K130 101 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 ERICH6BQ5W0A0 696 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 GTF3C6Q969F1 213 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 LRFN3Q9BTN0 628 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 C11orf16Q9NQ32 467 aa20.82■□□□□ 0.92
CLK1-211ENST00000481641 PI4K2BG5E9Z4 385 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 MARCH6O60337 910 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 ATF7P17544 494 aaPredicted RBP20.81■□□□□ 0.92
CLK1-211ENST00000481641 KRT2P35908 639 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 DNM2P50570 870 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 NEK4P51957 841 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 RBM10P98175 930 aaKnown RBP20.81■□□□□ 0.92
CLK1-211ENST00000481641 ZP2Q05996 745 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 NCAPH2Q6IBW4 605 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 NSUN7Q8NE18 718 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms