RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 APBB2Q92870 758 aa17.35■□□□□ 0.37
CNKSR1-206ENST00000481077 TMEM143Q96AN5 459 aa17.35■□□□□ 0.37
CNKSR1-206ENST00000481077 PLIN2Q99541 437 aa17.35■□□□□ 0.37
CNKSR1-206ENST00000481077 OSMRQ99650 979 aa17.35■□□□□ 0.37
CNKSR1-206ENST00000481077 IFIH1Q9BYX4 1025 aaKnown RBP17.35■□□□□ 0.37
CNKSR1-206ENST00000481077 OSBPL7Q9BZF2 842 aa17.35■□□□□ 0.37
CNKSR1-206ENST00000481077 CCSER1Q9C0I3 900 aa17.35■□□□□ 0.37
CNKSR1-206ENST00000481077 ZBBXA8MT70 800 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 E9PMD0 336 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 BAIAP3O94812 1187 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 PAK2Q13177 524 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 GRB10Q13322 594 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 PRPF31Q8WWY3 499 aaKnown RBP17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 SYMPKQ92797 1274 aaKnown RBP17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 EPSTI1Q96J88 318 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 PNMA5Q96PV4 448 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 ADAMTS10Q9H324 1103 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 CDHR5Q9HBB8 845 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 XPNPEP1Q9NQW7 623 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 COL4A3BPQ9Y5P4 624 aa17.34■□□□□ 0.37
CNKSR1-206ENST00000481077 SIP14410 1827 aa17.33■□□□□ 0.37
CNKSR1-206ENST00000481077 ABHD14A-ACY1A0A1B0GW23 586 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 ASAP2O43150 1006 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 CUTAO60888 179 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 EFCAB14O75071 495 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 RPS6KA5O75582 802 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 ME1P48163 572 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 MXD4Q14582 209 aaPredicted RBP17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 ODR4Q5SWX8 454 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 MAEAQ7L5Y9 396 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 KCNK18Q7Z418 384 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 ZNF410Q86VK4 478 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 KSR1Q8IVT5 923 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 ZNF668Q96K58 619 aaPredicted RBP17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 NLRP4Q96MN2 994 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 AGO3Q9H9G7 860 aaKnown RBP17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 RCOR1Q9UKL0 485 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 SLC4A7Q9Y6M7 1214 aa17.33■□□□□ 0.36
CNKSR1-206ENST00000481077 LOXHD1Q8IVV2 1947 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 SSBP05455 408 aaKnown RBP eCLIP17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 SRGAP2CP0DJJ0 459 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 CYP11B2P19099 503 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 EIF4BP23588 611 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 CD52P31358 61 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 KCNJ6P48051 423 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 LAMTOR4Q0VGL1 99 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 FAM102BQ5T8I3 360 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 RASIP1Q5U651 963 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 USP49Q70CQ1 688 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 TMEM40Q8WWA1 233 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 GCOM2Q9BZD3 368 aaPredicted RBP17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 CXXC1Q9P0U4 656 aaPredicted RBP17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 PADI3Q9ULW8 664 aa17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 NOC2LQ9Y3T9 749 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 LAMA2P24043 3122 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-206ENST00000481077 A0A087WZ62 844 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 GPR182O15218 404 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 DARSP14868 501 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 PLCG1P19174 1290 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 ARL2P36404 184 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 NFX1Q12986 1120 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 TFDP1Q14186 410 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 LRIT3Q3SXY7 679 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 HABP4Q5JVS0 413 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 SYT2Q8N9I0 419 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 TET1Q8NFU7 2136 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 SPATA32Q96LK8 384 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 FDXACB1Q9BRP7 624 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 FTHL17Q9BXU8 183 aa17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 SCAND2PQ9GZW5 306 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 POLR3FQ9H1D9 316 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-206ENST00000481077 WDR5P61964 334 aaKnown RBP17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 RRAGBQ5VZM2 374 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 FAM43BQ6ZT52 329 aaPredicted RBP17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 FAM228AQ86W67 206 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 RNF149Q8NC42 400 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 CHAMP1Q96JM3 812 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 INO80BQ9C086 356 aaPredicted RBP17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 ERVK-5Q9HDB9 667 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 GPRC5CQ9NQ84 441 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 PCDHA7Q9UN72 937 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 ST3GAL5Q9UNP4 418 aa17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
CNKSR1-206ENST00000481077 LAMA3Q16787 3333 aa17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 RBAK-RBAKDNI3L0D1 243 aa17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 ATP2A2P16615 1042 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 GLRA2P23416 452 aa17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 PHKA2P46019 1235 aa17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 SLC12A3P55017 1021 aa17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 AXDND1Q5T1B0 1012 aaPredicted RBP17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 RINT1Q6NUQ1 792 aa17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
CNKSR1-206ENST00000481077 ASAP3Q8TDY4 903 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms