RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 ZNF384Q8TF68 577 aa7.45□□□□□ -1.22
VPS50-215ENST00000480943 BRI3BPQ8WY22 251 aa7.45□□□□□ -1.22
VPS50-215ENST00000480943 NSUN4Q96CB9 384 aaKnown RBP7.45□□□□□ -1.22
VPS50-215ENST00000480943 PTPN18Q99952 460 aa7.45□□□□□ -1.22
VPS50-215ENST00000480943 IDI2Q9BXS1 227 aa7.45□□□□□ -1.22
VPS50-215ENST00000480943 LRP2BPQ9P2M1 347 aa7.45□□□□□ -1.22
VPS50-215ENST00000480943 DBNLQ9UJU6 430 aaKnown RBP7.45□□□□□ -1.22
VPS50-215ENST00000480943 DDX19BQ9UMR2 479 aa7.45□□□□□ -1.22
VPS50-215ENST00000480943 NOP58Q9Y2X3 529 aaKnown RBP7.45□□□□□ -1.22
VPS50-215ENST00000480943 ATRNL1Q5VV63 1379 aa7.45□□□□□ -1.22
VPS50-215ENST00000480943 GPR75-ASB3A0A0A6YYF3 556 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 DDTLA6NHG4 134 aaPredicted RBP7.44□□□□□ -1.22
VPS50-215ENST00000480943 RBAK-RBAKDNI3L0D1 243 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 AKAP8O43823 692 aaKnown RBP7.44□□□□□ -1.22
VPS50-215ENST00000480943 WDHD1O75717 1129 aaPredicted RBP7.44□□□□□ -1.22
VPS50-215ENST00000480943 LDHCP07864 332 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 DLG4P78352 724 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 PPIL2Q13356 520 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 AACSQ86V21 672 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 FAM43AQ8N2R8 423 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 EAF2Q96CJ1 260 aaPredicted RBP7.44□□□□□ -1.22
VPS50-215ENST00000480943 Q96M66 194 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 NOL10Q9BSC4 688 aaKnown RBP7.44□□□□□ -1.22
VPS50-215ENST00000480943 LRRC3Q9BY71 257 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 IL1RAPL2Q9NP60 686 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 SRRDQ9UH36 339 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 DOCK3Q8IZD9 2030 aa7.44□□□□□ -1.22
VPS50-215ENST00000480943 COL2A1P02458 1487 aaPredicted RBP7.43□□□□□ -1.22
VPS50-215ENST00000480943 HTTP42858 3142 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 CHURC1-FNTBB4DL54 471 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 HMMRO75330 724 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 CETPP11597 493 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 ZNF16P17020 682 aaPredicted RBP7.43□□□□□ -1.22
VPS50-215ENST00000480943 SOX10P56693 466 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 PPATQ06203 517 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 SNAPC2Q13487 334 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 NOL9Q5SY16 702 aaKnown RBP7.43□□□□□ -1.22
VPS50-215ENST00000480943 C20orf194Q5TEA3 1177 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 NAA16Q6N069 864 aaPredicted RBP7.43□□□□□ -1.22
VPS50-215ENST00000480943 ERC1Q8IUD2 1116 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 TEX11Q8IYF3 940 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 PHACTR4Q8IZ21 702 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.43□□□□□ -1.22
VPS50-215ENST00000480943 CD99L2Q8TCZ2 262 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 RNF141Q8WVD5 230 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 GPR20Q99678 358 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 TRIT1Q9H3H1 467 aaKnown RBP7.43□□□□□ -1.22
VPS50-215ENST00000480943 PIH1D3Q9NQM4 214 aaKnown RBP7.43□□□□□ -1.22
VPS50-215ENST00000480943 AATFQ9NY61 560 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS50-215ENST00000480943 ZNF112Q9UJU3 913 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 KCNH3Q9ULD8 1083 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 TRIM17Q9Y577 477 aa7.43□□□□□ -1.22
VPS50-215ENST00000480943 BTBD19C9JJ37 291 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 DNAJA2O60884 412 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 PKN2Q16513 984 aaKnown RBP7.42□□□□□ -1.22
VPS50-215ENST00000480943 HSP90AB4PQ58FF6 505 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 FBXO46Q6PJ61 603 aaPredicted RBP7.42□□□□□ -1.22
VPS50-215ENST00000480943 TMPRSS7Q7RTY8 843 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 ADGRA1Q86SQ6 560 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 RPAP2Q8IXW5 612 aaPredicted RBP7.42□□□□□ -1.22
VPS50-215ENST00000480943 SCYL3Q8IZE3 742 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 DTWD2Q8NBA8 298 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 SH3RF3Q8TEJ3 882 aaPredicted RBP7.42□□□□□ -1.22
VPS50-215ENST00000480943 ERO1AQ96HE7 468 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 ZNF512BQ96KM6 892 aaPredicted RBP7.42□□□□□ -1.22
VPS50-215ENST00000480943 CCDC74BQ96LY2 380 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 OSBPL5Q9H0X9 879 aaPredicted RBP7.42□□□□□ -1.22
VPS50-215ENST00000480943 ZBTB40Q9NUA8 1239 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.42□□□□□ -1.22
VPS50-215ENST00000480943 PDE4DIPQ5VU43 2346 aa7.42□□□□□ -1.22
VPS50-215ENST00000480943 CENPFP49454 3210 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 OTOL1A6NHN0 477 aaPredicted RBP7.41□□□□□ -1.22
VPS50-215ENST00000480943 GREM1O60565 184 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 IDH1O75874 414 aaKnown RBP7.41□□□□□ -1.22
VPS50-215ENST00000480943 BAG3O95817 575 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 MAP4K4O95819 1239 aaPredicted RBP7.41□□□□□ -1.22
VPS50-215ENST00000480943 MFAP1P55081 439 aaKnown RBP7.41□□□□□ -1.22
VPS50-215ENST00000480943 DYNLL1P63167 89 aaKnown RBP7.41□□□□□ -1.22
VPS50-215ENST00000480943 SP3Q02447 781 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 OTOP1Q7RTM1 612 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 MAPKAPK5Q8IW41 473 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 SIRT2Q8IXJ6 389 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 TMEM87AQ8NBN3 555 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 KIF1BPQ96EK5 621 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 KREMEN1Q96MU8 473 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 ALPK1Q96QP1 1244 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 CHMP4BQ9H444 224 aaKnown RBP7.41□□□□□ -1.22
VPS50-215ENST00000480943 ANTXR1Q9H6X2 564 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.41□□□□□ -1.22
VPS50-215ENST00000480943 BRMS1Q9HCU9 246 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 GPATCH2Q9NW75 528 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 PCDHB14Q9Y5E9 798 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 FLT1P17948 1338 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 PLXNB2O15031 1838 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 PARP14Q460N5 1801 aa7.41□□□□□ -1.22
VPS50-215ENST00000480943 KIAA0100Q14667 2235 aaKnown RBP7.4□□□□□ -1.22
VPS50-215ENST00000480943 PDHXO00330 501 aa7.4□□□□□ -1.22
VPS50-215ENST00000480943 IFIT2P09913 472 aaKnown RBP7.4□□□□□ -1.22
VPS50-215ENST00000480943 TPP2P29144 1249 aaPredicted RBP7.4□□□□□ -1.22
VPS50-215ENST00000480943 CHMP4BP1P59074 171 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms