RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 GCOM2Q9BZD3 368 aaPredicted RBP16.83■□□□□ 0.28
TDP2-205ENST00000480495 ELAC1Q9H777 363 aaKnown RBP16.83■□□□□ 0.28
TDP2-205ENST00000480495 ZSWIM4Q9H7M6 989 aa16.83■□□□□ 0.28
TDP2-205ENST00000480495 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.28
TDP2-205ENST00000480495 CYP26B1Q9NR63 512 aa16.83■□□□□ 0.28
TDP2-205ENST00000480495 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
TDP2-205ENST00000480495 ZSCAN20P17040 1043 aaPredicted RBP16.82■□□□□ 0.28
TDP2-205ENST00000480495 GUCY1B3Q02153 619 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 DRP2Q13474 957 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 NAALADL2Q58DX5 795 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 PLA2G4FQ68DD2 849 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 OTUD6AQ7L8S5 288 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 ZNF410Q86VK4 478 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 FBXO18Q8NFZ0 1043 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 NEK9Q8TD19 979 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 SLC7A3Q8WY07 619 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 DYDC2Q96IM9 177 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 CEP170P1Q96L14 293 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 SH2D3AQ9BRG2 576 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 LMAN2LQ9H0V9 348 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
TDP2-205ENST00000480495 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
TDP2-205ENST00000480495 MRPL42Q9Y6G3 142 aaKnown RBP16.82■□□□□ 0.28
TDP2-205ENST00000480495 CUL9Q8IWT3 2517 aa16.82■□□□□ 0.28
TDP2-205ENST00000480495 LOXHD1Q8IVV2 1947 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 GAS2O43903 313 aaKnown RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 ST18O60284 1047 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 YWHABP31946 246 aaKnown RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 RFC5P40937 340 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 NPEPPSP55786 919 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 PAN2Q504Q3 1202 aaKnown RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 P2RX5Q93086 422 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 ZNF668Q96K58 619 aaPredicted RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 MTMR9Q96QG7 549 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 DHX33Q9H6R0 707 aaKnown RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 TTC12Q9H892 705 aaPredicted RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 ATP6V0A4Q9HBG4 840 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 RGL1Q9NZL6 768 aa16.81■□□□□ 0.28
TDP2-205ENST00000480495 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
TDP2-205ENST00000480495 RALGAPA2Q2PPJ7 1873 aa16.8■□□□□ 0.28
TDP2-205ENST00000480495 WNT7AO00755 349 aa16.8■□□□□ 0.28
TDP2-205ENST00000480495 IBSPP21815 317 aaPredicted RBP16.8■□□□□ 0.28
TDP2-205ENST00000480495 POLGP54098 1239 aaPredicted RBP16.8■□□□□ 0.28
TDP2-205ENST00000480495 TFF2Q03403 129 aa16.8■□□□□ 0.28
TDP2-205ENST00000480495 ORC2Q13416 577 aaPredicted RBP16.8■□□□□ 0.28
TDP2-205ENST00000480495 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
TDP2-205ENST00000480495 HSD17B14Q9BPX1 270 aa16.8■□□□□ 0.28
TDP2-205ENST00000480495 EIF2AK1Q9BQI3 630 aaKnown RBP16.8■□□□□ 0.28
TDP2-205ENST00000480495 A0A087WZ62 844 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 HOXA2O43364 376 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 SLITRK3O94933 977 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 LYPLA2O95372 231 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
TDP2-205ENST00000480495 TXKP42681 527 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 GATMP50440 423 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 CYP4A11Q02928 519 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 CTTNQ14247 550 aaKnown RBP16.79■□□□□ 0.28
TDP2-205ENST00000480495 TPH2Q8IWU9 490 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 ZNF579Q8NAF0 562 aaKnown RBP16.79■□□□□ 0.28
TDP2-205ENST00000480495 TCP11Q8WWU5 503 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 FDXACB1Q9BRP7 624 aaPredicted RBP16.79■□□□□ 0.28
TDP2-205ENST00000480495 NSUN3Q9H649 340 aaKnown RBP16.79■□□□□ 0.28
TDP2-205ENST00000480495 CHST12Q9NRB3 414 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 DACT1Q9NYF0 836 aa16.79■□□□□ 0.28
TDP2-205ENST00000480495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.78■□□□□ 0.28
TDP2-205ENST00000480495 TBKBP1A7MCY6 615 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 GRM6O15303 877 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 BMP1P13497 986 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 MCM7P33993 719 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 TRAPPC10P48553 1259 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
TDP2-205ENST00000480495 XKR9Q5GH70 373 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 FAM102BQ5T8I3 360 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 ECHDC2Q86YB7 292 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 ADAMTS19Q8TE59 1207 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 PSPC1Q8WXF1 523 aaKnown RBP16.78■□□□□ 0.28
TDP2-205ENST00000480495 TMEM60Q9H2L4 133 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 UBE2ZQ9H832 354 aaPredicted RBP16.78■□□□□ 0.28
TDP2-205ENST00000480495 AAASQ9NRG9 546 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 ANKEF1Q9NU02 776 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 PLAGL2Q9UPG8 496 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 KIF3AQ9Y496 699 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
TDP2-205ENST00000480495 A0A0U1RQF3 1178 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 ASAP2O43150 1006 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 EOMESO95936 686 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 FGFR4P22455 802 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 EMC2Q15006 297 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 TCEAL5Q5H9L2 206 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 NLRP4Q96MN2 994 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 TRAIPQ9BWF2 469 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 TMEM117Q9H0C3 514 aa16.77■□□□□ 0.28
TDP2-205ENST00000480495 NOL7Q9UMY1 257 aaKnown RBP16.77■□□□□ 0.28
TDP2-205ENST00000480495 PCDHB12Q9Y5F1 795 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms