RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MAPK13O15264 365 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 GAS2O43903 313 aaKnown RBP12.1□□□□□ -0.47
VTI1A-204ENST00000480057 ADORA2AP29274 412 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 PSMC2P35998 433 aaKnown RBP12.1□□□□□ -0.47
VTI1A-204ENST00000480057 FXR1P51114 621 aaKnown RBP eCLIP12.1□□□□□ -0.47
VTI1A-204ENST00000480057 NPEPPSP55786 919 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 MCCD1P59942 119 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-204ENST00000480057 ZBED6P86452 979 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 CDK17Q00537 523 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 TSR1Q2NL82 804 aaKnown RBP12.1□□□□□ -0.47
VTI1A-204ENST00000480057 CEP135Q66GS9 1140 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-204ENST00000480057 PLPPR4Q7Z2D5 763 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 ZNF397Q8NF99 534 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-204ENST00000480057 OR8K1Q8NGG5 319 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 PTPN18Q99952 460 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 R3HDMLQ9H3Y0 253 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 ABHD10Q9NUJ1 306 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 SLC5A4Q9NY91 659 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 PASKQ96RG2 1323 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 TTC26A0AVF1 554 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 GTPBP10A4D1E9 387 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 XRCC5P13010 732 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 TRIM21P19474 475 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 HNRNPH3P31942 346 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 KRT9P35527 623 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 STAT5BP51692 787 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 ENPEPQ07075 957 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 HSP90AA2PQ14568 343 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 PPP2R5AQ15172 486 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 TARBP2Q15633 366 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 ZC2HC1CQ53FD0 456 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 FAM102BQ5T8I3 360 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 RGMBQ6NW40 437 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 CYP26C1Q6V0L0 522 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 ARMCX2Q7L311 632 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 GPR142Q7Z601 462 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 PLEKHH3Q7Z736 793 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 DHX37Q8IY37 1157 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 EMID1Q96A84 441 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 BORCS6Q96GS4 357 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 PCYT2Q99447 389 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 GPR20Q99678 358 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 NUCKS1Q9H1E3 243 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
VTI1A-204ENST00000480057 AZI2Q9H6S1 392 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 DAAM1Q9Y4D1 1078 aa12.09□□□□□ -0.47
VTI1A-204ENST00000480057 AKAP3O75969 853 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 ARIH2O95376 493 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 SLC10A3P09131 477 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 ATP4AP20648 1035 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 TCF7P36402 384 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 ZNF157P51786 506 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 TERF1P54274 439 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 PEX3P56589 373 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 SP4Q02446 784 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 KCNA1Q09470 495 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 EMC2Q15006 297 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 MEA1Q16626 185 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 SAPCD2Q86UD0 394 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 MAP4K3Q8IVH8 894 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 FAM186BQ8IYM0 893 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 C17orf53Q8N3J3 647 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 TMEM161BQ8NDZ6 487 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 EEF2KMTQ96G04 330 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 HHIPL1Q96JK4 782 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 CEP89Q96ST8 783 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 XPNPEP1Q9NQW7 623 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 ZNHIT6Q9NWK9 470 aaKnown RBP12.08□□□□□ -0.48
VTI1A-204ENST00000480057 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
VTI1A-204ENST00000480057 TMEM150BA6NC51 233 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 RASSF10A6NK89 507 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 NOP56O00567 594 aaKnown RBP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 NKRFO15226 690 aaKnown RBP eCLIP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 TXNP10599 105 aaKnown RBP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 NAMPTP43490 491 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 NPTX2P47972 431 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 POLGP54098 1239 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 GOLGA8FQ08AF8 430 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 GOLGA8DPQ0D2H9 430 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 SREBF2Q12772 1141 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 LY6KQ17RY6 165 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 MTERF2Q49AM1 385 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms