RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 KIAA1468Q9P260 1216 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 ALPK3Q96L96 1907 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 TREHO43280 583 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 RHOBTB3O94955 611 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM13AO94988 1023 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 RPN1P04843 607 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 CYP2C9P11712 490 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 PLS3P13797 630 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 SCP2P22307 547 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 CASP1P29466 404 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 DNM2P50570 870 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 RBL2Q08999 1139 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 COASYQ13057 564 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 PTK7Q13308 1070 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 MXD4Q14582 209 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 CAMK4Q16566 473 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 TRIML1Q8N9V2 468 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 PSPC1Q8WXF1 523 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 SMARCE1Q969G3 411 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 MAP7D2Q96T17 732 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 SENP6Q9GZR1 1112 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 C11orf49Q9H6J7 331 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 LARSQ9P2J5 1176 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 KCNG1Q9UIX4 513 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
TRAPPC12-218ENST00000479897 RSPH10B2B2RC85 870 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 ASAP2O43150 1006 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 CAND2O75155 1236 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 RSPH10BP0C881 870 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 MAPTP10636 758 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 CLCN3P51790 818 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 CDC42EP1Q00587 391 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 POU5F1BQ06416 359 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 RAD51AP2Q09MP3 1159 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 DRP2Q13474 957 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 PPP2R5AQ15172 486 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 PTGISQ16647 500 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM102BQ5T8I3 360 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 NECAB2Q7Z6G3 386 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM126BQ8IXS8 530 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 KIAA0319LQ8IZA0 1049 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 NME8Q8N427 588 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 LRRC71Q8N4P6 559 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 SPIRE2Q8WWL2 714 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 PAWRQ96IZ0 340 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 FIZ1Q96SL8 496 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 EXOC1Q9NV70 894 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 PANK4Q9NVE7 773 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
TRAPPC12-218ENST00000479897 B4GALT4O60513 344 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 CD4P01730 458 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 IDEP14735 1019 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 GLRA2P23416 452 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 NAMPTP43490 491 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 NCKAP1LP55160 1127 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 SOX10P56693 466 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 PSMD2Q13200 908 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 DMP1Q13316 513 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 KMT5BQ4FZB7 885 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 COBLL1Q53SF7 1204 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 CDCA2Q69YH5 1023 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZNF410Q86VK4 478 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 SFR1Q86XK3 245 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 PRPF31Q8WWY3 499 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 BSNDQ8WZ55 320 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 IFT74Q96LB3 600 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 NFKBIZQ9BYH8 718 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 ST6GALNAC4Q9H4F1 302 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 SUGCTQ9HAC7 445 aa13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 TRMT13Q9NUP7 481 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 SUCLA2Q9P2R7 463 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 H0YCG3 227 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms