RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 ARL13BQ3SXY8 428 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 SYNE4Q8N205 404 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 NLRP4Q96MN2 994 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 TMEM260Q9NX78 707 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 G3BP2Q9UN86 482 aaKnown RBP20.99■□□□□ 0.95
ABCA2-217ENST00000479446 USP17L10C9JJH3 530 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 DNAJC8O75937 253 aaPredicted RBP20.99■□□□□ 0.95
ABCA2-217ENST00000479446 LMNAP02545 664 aaKnown RBP20.99■□□□□ 0.95
ABCA2-217ENST00000479446 CALB1P05937 261 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 PHEXP78562 749 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 HDLBPQ00341 1268 aaKnown RBP20.99■□□□□ 0.95
ABCA2-217ENST00000479446 KCNB1Q14721 858 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 KRT80Q6KB66 452 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 N4BP2L2Q92802 583 aaPredicted RBP20.99■□□□□ 0.95
ABCA2-217ENST00000479446 TTC1Q99614 292 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 CAPN11Q9UMQ6 739 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 CHUKO15111 745 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.99■□□□□ 0.95
ABCA2-217ENST00000479446 ORC6Q9Y5N6 252 aa20.99■□□□□ 0.95
ABCA2-217ENST00000479446 LAMC1P11047 1609 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 PP2D1A8MPX8 630 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 CFLARO15519 480 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 RCSD1Q6JBY9 416 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 THNSL1Q8IYQ7 743 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 BANK1Q8NDB2 785 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 CDC42BPGQ6DT37 1551 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 ATP8B3O60423 1300 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 TADA3O75528 432 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 KCNJ6P48051 423 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 DRAP1Q14919 205 aaPredicted RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 FAM47EQ6ZV65 393 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 METTL16Q86W50 562 aaKnown RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 SRRM1Q8IYB3 904 aaKnown RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 ZNF564Q8TBZ8 553 aaPredicted RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 TMEM60Q9H2L4 133 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 SLITRK6Q9H5Y7 841 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 FAM187AA6NFU0 413 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 ORC4O43929 436 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 TRPA1O75762 1119 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 STOX1Q6ZVD7 989 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 CD209Q9NNX6 404 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 ZCCHC17Q9NP64 241 aaKnown RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 TARSL2A2RTX5 802 aaKnown RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 EPM2AIP1Q7L775 607 aaPredicted RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 EPC1Q9H2F5 836 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 TRPM1Q7Z4N2 1603 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 PNPLA7Q6ZV29 1317 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 CLDN3O15551 220 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 MORC4Q8TE76 937 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 DYDC2Q96IM9 177 aa20.98■□□□□ 0.95
ABCA2-217ENST00000479446 QTRT2Q9H974 415 aaKnown RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 PPARGC1AQ9UBK2 798 aaKnown RBP20.98■□□□□ 0.95
ABCA2-217ENST00000479446 CRKP46108 304 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 COG1Q8WTW3 980 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 CPDO75976 1380 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 A2ML1A8K2U0 1454 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 ZBTB24O43167 697 aaPredicted RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 CTIFO43310 598 aaKnown RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 RFX1P22670 979 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 KLHL38Q2WGJ6 581 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 BEND6Q5SZJ8 279 aaPredicted RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 VPS39Q96JC1 886 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 FBXO2Q9UK22 296 aaPredicted RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 INTUQ9ULD6 942 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 STRIP2Q9ULQ0 834 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 KRT76Q01546 638 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 ABCC3O15438 1527 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 PFDN1O60925 122 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 VAMP7P51809 220 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 TSTA3Q13630 321 aaPredicted RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 ZNF394Q53GI3 561 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 PPP6R3Q5H9R7 873 aaPredicted RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 WDR24Q96S15 920 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 RMDN3Q96TC7 470 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 C11orf70Q9BRQ4 267 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 INTS2Q9H0H0 1204 aaKnown RBP20.97■□□□□ 0.95
ABCA2-217ENST00000479446 MROH7-TTC4A0A0A0MT08 1334 aa20.97■□□□□ 0.95
ABCA2-217ENST00000479446 GYG2O15488 501 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 HSPA4LO95757 839 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 ZNF211Q13398 564 aaPredicted RBP20.96■□□□□ 0.95
ABCA2-217ENST00000479446 KLC3Q6P597 504 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 PNPLA6Q8IY17 1366 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 HECW2Q9P2P5 1572 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 ATP1A1P05023 1023 aaKnown RBP20.96■□□□□ 0.95
ABCA2-217ENST00000479446 ZSCAN20P17040 1043 aaPredicted RBP20.96■□□□□ 0.95
ABCA2-217ENST00000479446 TAF1BQ53T94 588 aaPredicted RBP20.96■□□□□ 0.95
ABCA2-217ENST00000479446 TMTC4Q5T4D3 741 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 PDXDC1Q6P996 788 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 TMEM270Q6UE05 265 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 DHX38Q92620 1227 aaKnown RBP20.96■□□□□ 0.95
ABCA2-217ENST00000479446 ATP6V1G3Q96LB4 118 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 CCDC138Q96M89 665 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 NUP85Q9BW27 656 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.96■□□□□ 0.95
ABCA2-217ENST00000479446 NARFQ9UHQ1 456 aa20.96■□□□□ 0.95
ABCA2-217ENST00000479446 USP42Q9H9J4 1324 aaKnown RBP20.96■□□□□ 0.95
ABCA2-217ENST00000479446 POTEFA5A3E0 1075 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms