RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 MSH4O15457 936 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 BMP3P12645 472 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 HSPA9P38646 679 aaKnown RBP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 GIT2Q14161 759 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 DACT2Q5SW24 774 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 MAB21L3Q8N8X9 362 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 RDH13Q8NBN7 331 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 STAMBPL1Q96FJ0 436 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 BCCIPQ9P287 314 aaKnown RBP eCLIP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 PCDHA2Q9Y5H9 948 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 SCN9AQ15858 1988 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 BUB1BO60566 1050 aaPredicted RBP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 RAD17O75943 681 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 SPATA31C1P0DKV0 1188 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 INHBEP58166 350 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 MYO1EQ12965 1108 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 HIBCHQ6NVY1 386 aaPredicted RBP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 ZNF483Q8TF39 744 aaPredicted RBP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 THOC1Q96FV9 657 aaKnown RBP15.34■□□□□ 0.05
CCDC78-210ENST00000478979 NOX5Q96PH1 765 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 KCTD10Q9H3F6 313 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 ANKRD31Q8N7Z5 1873 aa15.34■□□□□ 0.05
CCDC78-210ENST00000478979 PODNQ7Z5L7 613 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 TRIM59Q8IWR1 403 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 ETNPPLQ8TBG4 499 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 NSMCE1Q8WV22 266 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 CCT6BQ92526 530 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 RAPGEF5Q92565 580 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 HOOK2Q96ED9 719 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 PLCB1Q9NQ66 1216 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 CEP72Q9P209 647 aa15.33■□□□□ 0.05
CCDC78-210ENST00000478979 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.05
CCDC78-210ENST00000478979 FOCADQ5VW36 1801 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 C5orf60A6NFR6 353 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 TBCAO75347 108 aaKnown RBP15.33■□□□□ 0.04
CCDC78-210ENST00000478979 DNAJC8O75937 253 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-210ENST00000478979 HSD17B3P37058 310 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 HLTFQ14527 1009 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC78-210ENST00000478979 ASIC2Q16515 512 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 COBLL1Q53SF7 1204 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 ODF2Q5BJF6 829 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 SPDL1Q96EA4 605 aa15.33■□□□□ 0.04
CCDC78-210ENST00000478979 CNOT8Q9UFF9 292 aaKnown RBP15.33■□□□□ 0.04
CCDC78-210ENST00000478979 EME2A4GXA9 379 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 PHF20L1A8MW92 1017 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 AKAP3O75969 853 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 SPIRE1Q08AE8 756 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 SEMA3FQ13275 785 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 COG2Q14746 738 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 PPP1R7Q15435 360 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 GKAP1Q5VSY0 366 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 TMEM179Q6ZVK1 233 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 ARMC2Q8NEN0 867 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 DCAF4Q8WV16 495 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 TATDN2Q93075 761 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 LENG9Q96B70 501 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 ARMCX3Q9UH62 379 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 H0YIN7 160 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 HNRNPH3P31942 346 aaKnown RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 USP11P51784 963 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 SLFN12Q8IYM2 578 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 ERMNQ8TAM6 284 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 FBXO28Q9NVF7 368 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 NYAP2Q9P242 653 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 PRR12Q9ULL5 1215 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 RAD51CO43502 376 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 HOXD13P35453 343 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 PEX19P40855 299 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 MAP2K1Q02750 393 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 ZNF844Q08AG5 666 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 LRIG3Q6UXM1 1119 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 CPLX4Q7Z7G2 160 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 KLHL7Q8IXQ5 586 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 MYCT1Q8N699 235 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 EIF2AK1Q9BQI3 630 aaKnown RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 KIF9Q9HAQ2 790 aa15.32■□□□□ 0.04
CCDC78-210ENST00000478979 AJAP1Q9UKB5 411 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-210ENST00000478979 H0YGN5 161 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 PPIP5K2O43314 1243 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 LCA5LO95447 670 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 SERPING1P05155 500 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 PPP2R2AP63151 447 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 PTK2Q05397 1052 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 UAP1Q16222 522 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-210ENST00000478979 DYDC2Q96IM9 177 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 NFS1Q9Y697 457 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 CTNNA1P35221 906 aaKnown RBP15.31■□□□□ 0.04
CCDC78-210ENST00000478979 CYP2J2P51589 502 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 KNOP1Q1ED39 458 aaKnown RBP15.31■□□□□ 0.04
CCDC78-210ENST00000478979 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-210ENST00000478979 LMBR1Q8WVP7 490 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms