RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PCDH8O95206 1070 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 MANFP55145 182 aaKnown RBP5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 EVA1CP58658 441 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 USP10Q14694 798 aaKnown RBP5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 PDCD1Q15116 288 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 BMP8AQ7Z5Y6 402 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 RALYLQ86SE5 291 aaKnown RBP5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 CNTD1Q8N815 330 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 MBD6Q96DN6 1003 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 KCNC2Q96PR1 638 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 PITHD1Q9GZP4 211 aaPredicted RBP5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 HOMER2Q9NSB8 354 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 C14orf119Q9NWQ9 140 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 DENND2AQ9ULE3 1009 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 PPP2R3BQ9Y5P8 575 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 NUMBLQ9Y6R0 609 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 MYPNQ86TC9 1320 aa5.38□□□□□ -1.55
SMARCA1-204ENST00000478420 A0A0A6YYJ9 748 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 PRSS38A1L453 326 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 OPHN1O60890 802 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 CLEC2LP0C7M8 214 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 CSF2RBP32927 897 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 MEOX1P50221 254 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 SCAND1P57086 179 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 ITKQ08881 620 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 FSCN1Q16658 493 aaKnown RBP5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 CCDC62Q6P9F0 684 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 GPR155Q7Z3F1 870 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 KBTBD2Q8IY47 623 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 RTKN2Q8IZC4 609 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 LGI4Q8N135 537 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 FEZF2Q8TBJ5 459 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 DYDC2Q96IM9 177 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 HIST1H2AHQ96KK5 128 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 HIST1H2AJQ99878 128 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 NOL10Q9BSC4 688 aaKnown RBP5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 MENTQ9BUN1 341 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 WASHC2AQ641Q2 1341 aa5.37□□□□□ -1.55
SMARCA1-204ENST00000478420 K7ESF4 209 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 KATNA1O75449 491 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 PFKMP08237 780 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 ZNF888P0CJ79 500 aaPredicted RBP5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 ENPP1P22413 925 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 STAT5BP51692 787 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 ANTXR2P58335 489 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 ERVK-21P61565 698 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 UGT8Q16880 541 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 ZNF568Q3ZCX4 644 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 CT83Q5H943 113 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 ZMAT1Q5H9K5 638 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 TRIM68Q6AZZ1 485 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 PLEKHH3Q7Z736 793 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 CMIPQ8IY22 773 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 RPUSD2Q8IZ73 545 aaKnown RBP5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 ZDHHC14Q8IZN3 488 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 CDYL2Q8N8U2 506 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 LMBR1Q8WVP7 490 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 RSAD2Q8WXG1 361 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 MTMR8Q96EF0 704 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 PARD6AQ9NPB6 346 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 POLR3BQ9NW08 1133 aaPredicted RBP5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 USP18Q9UMW8 372 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 VWA7Q9Y334 891 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 PCDHB6Q9Y5E3 794 aa5.36□□□□□ -1.55
SMARCA1-204ENST00000478420 WASHC2CQ9Y4E1 1318 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 B4GALT3O60512 393 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 B4GALT4O60513 344 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 H2AFYO75367 372 aaKnown RBP5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 GPR15P49685 360 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 MRE11P49959 708 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 RRADP55042 308 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 SESN2P58004 480 aaPredicted RBP5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 KLF1Q13351 362 aaPredicted RBP5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 MTMR1Q13613 665 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 PCOLCEQ15113 449 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 PITRM1Q5JRX3 1037 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 KLHDC10Q6PID8 442 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 LARP4Q71RC2 724 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 BCL6BQ8N143 479 aaPredicted RBP5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 GAB3Q8WWW8 586 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 GFM2Q969S9 779 aaKnown RBP5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 EAF2Q96CJ1 260 aaPredicted RBP5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 WDR92Q96MX6 357 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 HAPLN2Q9GZV7 340 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 FAM184BQ9ULE4 1060 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 PTPN22Q9Y2R2 807 aa5.35□□□□□ -1.55
SMARCA1-204ENST00000478420 OTOL1A6NHN0 477 aaPredicted RBP5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 NRP2O60462 931 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 LPLP06858 475 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 XPAP23025 273 aaPredicted RBP5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 PPARAQ07869 468 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 MAN2A1Q16706 1144 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 ZNF827Q17R98 1081 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 CCDC178Q5BJE1 867 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 SYDE2Q5VT97 1194 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 AGBL4Q5VU57 503 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 FRMD5Q7Z6J6 570 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms