RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MAPK7Q13164 816 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 KCTD2Q14681 263 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 ARHGAP29Q52LW3 1261 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 ARSIQ5FYB1 569 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 XKR9Q5GH70 373 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 TREML2Q5T2D2 321 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 ABHD15Q6UXT9 468 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 CACNA2D4Q7Z3S7 1137 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 USP37Q86T82 979 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 SYCP3Q8IZU3 236 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 ABRAQ8N0Z2 381 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 FAM133AQ8N9E0 248 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 OPTNQ96CV9 577 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 SLC10A4Q96EP9 437 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 FAM167AQ96KS9 214 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 UIMC1Q96RL1 719 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 FIZ1Q96SL8 496 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 EIF3CQ99613 913 aaKnown RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 DMAC2Q9NW81 257 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 UQCRHLA0A096LP55 91 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 ASB14A6NK59 587 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 USP27XA6NNY8 438 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 RSPH10B2B2RC85 870 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 K7ENM7 598 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 PMM2O15305 246 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 CTIFO43310 598 aaKnown RBP8.7□□□□□ -1.02
VMA21-203ENST00000477649 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
VMA21-203ENST00000477649 ATP9AO75110 1047 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 CCNE2O96020 404 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 UQCRHP07919 91 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 CCDC172P0C7W6 258 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 RSPH10BP0C881 870 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 CHRM1P11229 460 aaPredicted RBP8.7□□□□□ -1.02
VMA21-203ENST00000477649 HOXD13P35453 343 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 RFC5P40937 340 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 SLC26A2P50443 739 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 CASP5P51878 434 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 NCKAP1LP55160 1127 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 ACTR2P61160 394 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 DMP1Q13316 513 aaPredicted RBP8.7□□□□□ -1.02
VMA21-203ENST00000477649 SPA17Q15506 151 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 FAM160B1Q5W0V3 765 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 RAD9BQ6WBX8 426 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 GBP6Q6ZN66 633 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 INTS8Q75QN2 995 aaKnown RBP8.7□□□□□ -1.02
VMA21-203ENST00000477649 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 FAM186BQ8IYM0 893 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 GLIS3Q8NEA6 775 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 MORC4Q8TE76 937 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 IFT74Q96LB3 600 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 CCDC42Q96M95 316 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 JPH2Q9BR39 696 aaPredicted RBP8.7□□□□□ -1.02
VMA21-203ENST00000477649 MMRN2Q9H8L6 949 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 L2HGDHQ9H9P8 463 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 AGPAT3Q9NRZ7 376 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 NRBP2Q9NSY0 501 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 BTBD7Q9P203 1132 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 WRAP73Q9P2S5 460 aaPredicted RBP8.7□□□□□ -1.02
VMA21-203ENST00000477649 WDR90Q96KV7 1748 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 ASTN1O14525 1302 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 IGSF9BQ9UPX0 1349 aa8.7□□□□□ -1.02
VMA21-203ENST00000477649 DNAJC25-GNG10A0A024R161 153 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 IGKV6D-21A0A0A0MT36 114 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 SOWAHDA6NJG2 315 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 TGFB1I1O43294 461 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 KRT86O43790 486 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 STRNO43815 780 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 USO1O60763 962 aaKnown RBP8.69□□□□□ -1.02
VMA21-203ENST00000477649 AKAP3O75969 853 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 GFPT2O94808 682 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 LCA5LO95447 670 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ZBTB48P10074 688 aaPredicted RBP8.69□□□□□ -1.02
VMA21-203ENST00000477649 KRT13P13646 458 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ERCC3P19447 782 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 NMT1P30419 496 aaKnown RBP8.69□□□□□ -1.02
VMA21-203ENST00000477649 CASQ1P31415 396 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 GNG11P61952 73 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ERVK-24P63145 666 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 IRF5Q13568 498 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 MOGSQ13724 837 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 EXOC3L4Q17RC7 722 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 SLC9C1Q4G0N8 1177 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 EAPPQ56P03 285 aaPredicted RBP8.69□□□□□ -1.02
VMA21-203ENST00000477649 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 PDXDC1Q6P996 788 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 TRIM65Q6PJ69 517 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 METTL7BQ6UX53 244 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 SYT10Q6XYQ8 523 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 TOGARAM2Q6ZUX3 1019 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 HAUS6Q7Z4H7 955 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ANKRD23Q86SG2 305 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 DAW1Q8N136 415 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 GPRC5AQ8NFJ5 357 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 AFAP1L1Q8TED9 768 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 BORCS6Q96GS4 357 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ERO1AQ96HE7 468 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 CEP170P1Q96L14 293 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 MAP7D2Q96T17 732 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms