RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 KIFAP3Q92845 792 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 ERCC4Q92889 916 aaPredicted RBP17.94■□□□□ 0.46
VHL-203ENST00000477538 TMEM143Q96AN5 459 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 DRC1Q96MC2 740 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
VHL-203ENST00000477538 POLD4Q9HCU8 107 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 GPRC5CQ9NQ84 441 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 TMEM63CQ9P1W3 806 aa17.94■□□□□ 0.46
VHL-203ENST00000477538 SMIM35A0A1B0GVV1 85 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 RPN1P04843 607 aaKnown RBP17.93■□□□□ 0.46
VHL-203ENST00000477538 MKRN4PQ13434 485 aaPredicted RBP17.93■□□□□ 0.46
VHL-203ENST00000477538 DRP2Q13474 957 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 SNX17Q15036 470 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 CCDC65Q8IXS2 484 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 DAW1Q8N136 415 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 PSPC1Q8WXF1 523 aaKnown RBP17.93■□□□□ 0.46
VHL-203ENST00000477538 FAM49AQ9H0Q0 323 aaPredicted RBP17.93■□□□□ 0.46
VHL-203ENST00000477538 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 TRMT13Q9NUP7 481 aaKnown RBP17.93■□□□□ 0.46
VHL-203ENST00000477538 PANK4Q9NVE7 773 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 NOD1Q9Y239 953 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 SCN5AQ14524 2016 aa17.93■□□□□ 0.46
VHL-203ENST00000477538 DNAH12Q6ZR08 3092 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 FRMD3A2A2Y4 597 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 KLRC4O43908 158 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 B4GALT4O60513 344 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 SMC2O95347 1197 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 ARL2P36404 184 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 ZNF131P52739 623 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 C1orf53Q5VUE5 145 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 TAF2Q6P1X5 1199 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 UNC13DQ70J99 1090 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 SERINC5Q86VE9 423 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 FAM126BQ8IXS8 530 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 SMARCE1Q969G3 411 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 CTAGE1Q96RT6 745 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 MAP7D2Q96T17 732 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 TRPV6Q9H1D0 765 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 SUCLA2Q9P2R7 463 aaPredicted RBP17.92■□□□□ 0.46
VHL-203ENST00000477538 AKT3Q9Y243 479 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 PCDHA5Q9Y5H7 936 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 COL4A3BPQ9Y5P4 624 aa17.92■□□□□ 0.46
VHL-203ENST00000477538 PVALEFA0A1B0GWK0 134 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 SFI1A8K8P3 1242 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 GAP43P17677 238 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 RTP1P59025 263 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 COASYQ13057 564 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 PTK7Q13308 1070 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 UBE2Q1Q7Z7E8 422 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 KIAA0319LQ8IZA0 1049 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 TNS4Q8IZW8 715 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 ASAP3Q8TDY4 903 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 DNAJB3Q8WWF6 145 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 CCDC47Q96A33 483 aaKnown RBP17.91■□□□□ 0.46
VHL-203ENST00000477538 C17orf75Q9HAS0 396 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 PARVGQ9HBI0 331 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 EXOC1Q9NV70 894 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 KIAA1468Q9P260 1216 aa17.91■□□□□ 0.46
VHL-203ENST00000477538 TLR3O15455 904 aaKnown RBP17.9■□□□□ 0.46
VHL-203ENST00000477538 PQBP1O60828 265 aaKnown RBP17.9■□□□□ 0.46
VHL-203ENST00000477538 CD4P01730 458 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 VTNP04004 478 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 PLS3P13797 630 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 GLRA2P23416 452 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 MXD4Q14582 209 aaPredicted RBP17.9■□□□□ 0.46
VHL-203ENST00000477538 PPP2R5AQ15172 486 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 TRIM60Q495X7 471 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 KMT5BQ4FZB7 885 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 HERC4Q5GLZ8 1057 aaPredicted RBP17.9■□□□□ 0.46
VHL-203ENST00000477538 ANKRD33Q7Z3H0 272 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 SFR1Q86XK3 245 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 RHPN2Q8IUC4 686 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 MYCT1Q8N699 235 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 SPATA20Q8TB22 786 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 PRPF31Q8WWY3 499 aaKnown RBP17.9■□□□□ 0.46
VHL-203ENST00000477538 BSNDQ8WZ55 320 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 IFT74Q96LB3 600 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 GSDMAQ96QA5 445 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 LARSQ9P2J5 1176 aaKnown RBP17.9■□□□□ 0.46
VHL-203ENST00000477538 SEL1LQ9UBV2 794 aa17.9■□□□□ 0.46
VHL-203ENST00000477538 CCDC85CA6NKD9 419 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 ASAP2O43150 1006 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 RPLP2P05387 115 aaKnown RBP17.89■□□□□ 0.45
VHL-203ENST00000477538 SARSP49591 514 aaKnown RBP17.89■□□□□ 0.45
VHL-203ENST00000477538 PEX3P56589 373 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 EHHADHQ08426 723 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 LAMTOR4Q0VGL1 99 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 DMP1Q13316 513 aaPredicted RBP17.89■□□□□ 0.45
VHL-203ENST00000477538 KCNB1Q14721 858 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 LRRC26Q2I0M4 334 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 ODR4Q5SWX8 454 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 NT5DC1Q5TFE4 455 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 RBM43Q6ZSC3 357 aaKnown RBP17.89■□□□□ 0.45
VHL-203ENST00000477538 RSPH3Q86UC2 560 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 DHX38Q92620 1227 aaKnown RBP17.89■□□□□ 0.45
VHL-203ENST00000477538 WNT8BQ93098 351 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 TOX2Q96NM4 488 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 RMND1Q9NWS8 449 aa17.89■□□□□ 0.45
VHL-203ENST00000477538 ATP11BQ9Y2G3 1177 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms