RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CEP63Q96MT8 703 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 RNPEPQ9H4A4 650 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 ST6GALNAC4Q9H4F1 302 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 ATP6V0A4Q9HBG4 840 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 NRBP2Q9NSY0 501 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 ZKSCAN5Q9Y2L8 839 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 PCDHB13Q9Y5F0 798 aa15.92■□□□□ 0.14
COL4A6-206ENST00000477085 ADGRA3Q8IWK6 1321 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 CLIC2O15247 247 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 TBC1D8O95759 1140 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 NR2F2P24468 414 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 DRP2Q13474 957 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 FILIP1LQ4L180 1135 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 IQSEC1Q6DN90 963 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 FAM114A1Q8IWE2 563 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 MCPH1Q8NEM0 835 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 ATP8B4Q8TF62 1192 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 KIFAP3Q92845 792 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 ZSWIM8A7E2V4 1837 aa15.91■□□□□ 0.14
COL4A6-206ENST00000477085 UBE4BO95155 1302 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 ESPNB1AK53 854 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 TISP43B9A030 160 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 CALUO43852 315 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 FGFR1OPO95684 399 aaKnown RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 NR3C1P04150 777 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 TPM3P06753 285 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 ARL2P36404 184 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 RGS2P41220 211 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 MTIF2P46199 727 aaKnown RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 CASP4P49662 377 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 POLGP54098 1239 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 RTP1P59025 263 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 IRX5P78411 483 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 OLFML2BQ68BL8 750 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 ZSCAN30Q86W11 494 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 ANKRD20A12PQ8NF67 263 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 ASAP3Q8TDY4 903 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 C16orf70Q9BSU1 422 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 POLR3FQ9H1D9 316 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 SMARCAD1Q9H4L7 1026 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 PYCARDQ9ULZ3 195 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 GABRQQ9UN88 632 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 GNEQ9Y223 722 aaKnown RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 MYH9P35579 1960 aaKnown RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 CCDC169A6NNP5 214 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 RNF225M0QZC1 329 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 AKAP3O75969 853 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 ALDH1A1P00352 501 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 LGALS2P05162 132 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 YY1P25490 414 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 PSMC4P43686 418 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 HTRA3P83110 453 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 LACTBP83111 547 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 TNFAIP2Q03169 654 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 UBXN1Q04323 297 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 VWA3BQ502W6 1294 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 TRAPPC12Q8WVT3 735 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 SPIRE2Q8WWL2 714 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 SOCS4Q8WXH5 440 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 LENG1Q96BZ8 264 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 APBA2Q99767 749 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 NOC4LQ9BVI4 516 aaKnown RBP15.9■□□□□ 0.14
COL4A6-206ENST00000477085 AGPAT3Q9NRZ7 376 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 DMAC2Q9NW81 257 aa15.9■□□□□ 0.14
COL4A6-206ENST00000477085 MAFO75444 373 aaPredicted RBP15.89■□□□□ 0.13
COL4A6-206ENST00000477085 ZNF286BP0CG31 522 aa15.89■□□□□ 0.13
COL4A6-206ENST00000477085 HOXD8P13378 290 aaPredicted RBP15.89■□□□□ 0.13
COL4A6-206ENST00000477085 GLRA2P23416 452 aa15.89■□□□□ 0.13
COL4A6-206ENST00000477085 NFIL3Q16649 462 aa15.89■□□□□ 0.13
COL4A6-206ENST00000477085 TAS1R3Q7RTX0 852 aa15.89■□□□□ 0.13
COL4A6-206ENST00000477085 GBP3Q9H0R5 595 aa15.89■□□□□ 0.13
COL4A6-206ENST00000477085 C17orf75Q9HAS0 396 aa15.89■□□□□ 0.13
COL4A6-206ENST00000477085 MYH11P35749 1972 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 IGKV6-21A0A0C4DH24 114 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 CETN3O15182 167 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 MMP3P08254 477 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 RFC5P40937 340 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 KLK7P49862 253 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 SLC26A2P50443 739 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 CCZ1BP86790 482 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 CCZ1P86791 482 aaPredicted RBP15.88■□□□□ 0.13
COL4A6-206ENST00000477085 DMP1Q13316 513 aaPredicted RBP15.88■□□□□ 0.13
COL4A6-206ENST00000477085 STXBP4Q6ZWJ1 553 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 TRIM59Q8IWR1 403 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 OR6J1Q8NGC5 347 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 SLC7A3Q8WY07 619 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 BORCS6Q96GS4 357 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 FAM167AQ96KS9 214 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 NDST4Q9H3R1 872 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 KMT5AQ9NQR1 393 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 TBX20Q9UMR3 447 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 ITIH6Q6UXX5 1313 aa15.88■□□□□ 0.13
COL4A6-206ENST00000477085 DENND3A2RUS2 1198 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 PPFIA4O75335 1185 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms