RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 MCM5P33992 734 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 SREBF1P36956 1147 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 CLCN3P51790 818 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 NIPA1Q7RTP0 329 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 CKAP2LQ8IYA6 745 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 FANCBQ8NB91 859 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 BBXQ8WY36 941 aaPredicted RBP18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 TMEM87BQ96K49 555 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 ADAMTS10Q9H324 1103 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 DZANK1Q9NVP4 752 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 RBM8AQ9Y5S9 174 aaKnown RBP18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 DMDP11532 3685 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 NT5C1B-RDH14C9J2C7 533 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 EOMESO95936 686 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 EPCAMP16422 314 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 NPR3P17342 541 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 ZNF76P36508 570 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 LIFRP42702 1097 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 METAP2P50579 478 aaKnown RBP eCLIP18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 NAPAP54920 295 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 NLRP11P59045 1033 aaKnown RBP18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 TRMT1LQ7Z2T5 733 aaKnown RBP18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 FEZF2Q8TBJ5 459 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 AUTS2Q8WXX7 1259 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 CYP26B1Q9NR63 512 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 MAFBQ9Y5Q3 323 aaPredicted RBP18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 SLC12A7Q9Y666 1083 aa18.68■□□□□ 0.58
APOBEC3F-203ENST00000476513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 FAM86B1E9PN63 330 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 FAM86B2P0C5J1 330 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 AOC1P19801 751 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 ALDH7A1P49419 539 aaKnown RBP18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 ADCY7P51828 1080 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 BCAR1P56945 870 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 BMS1Q14692 1282 aaKnown RBP18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 ZNF598Q86UK7 904 aaKnown RBP18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 PLA2G4DQ86XP0 818 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 TEX2Q8IWB9 1127 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 CCDC105Q8IYK2 499 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 VPS52Q8N1B4 723 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 LINC01465Q8N7H1 131 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 HELQQ8TDG4 1101 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 SLC22A17Q8WUG5 538 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 ZBP1Q9H171 429 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 AKT3Q9Y243 479 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 EVPLQ92817 2033 aa18.67■□□□□ 0.58
APOBEC3F-203ENST00000476513 EP300Q09472 2414 aaPredicted RBP18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 A0A0U1RQF3 1178 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 MAGEB2O15479 319 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 EIF4BP23588 611 aaKnown RBP18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 ANGPT1Q15389 498 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 EFCAB12Q6NXP0 572 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 PPP1R18Q6NYC8 613 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 TMEM173Q86WV6 379 aaPredicted RBP18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 MICU3Q86XE3 530 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 TMEM87AQ8NBN3 555 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 TMEM169Q96HH4 297 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 ZNF668Q96K58 619 aaPredicted RBP18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 MAP7D2Q96T17 732 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 IRAK3Q9Y616 596 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 CNTNAP5Q8WYK1 1306 aa18.66■□□□□ 0.58
APOBEC3F-203ENST00000476513 IGLV3-22A0A075B6J6 115 aa18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 IPO5O00410 1097 aaKnown RBP18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 CLK2P49760 499 aaKnown RBP18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 TMC5Q6UXY8 1006 aa18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 LRRC71Q8N4P6 559 aa18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 DTWD2Q8NBA8 298 aa18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 ACSF2Q96CM8 615 aaPredicted RBP18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 MRPL9Q9BYD2 267 aaKnown RBP18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 LRRC2Q9BYS8 371 aa18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 CEP131Q9UPN4 1083 aa18.65■□□□□ 0.58
APOBEC3F-203ENST00000476513 DCHS1Q96JQ0 3298 aa18.64■□□□□ 0.58
APOBEC3F-203ENST00000476513 SMCO2A6NFE2 343 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 CTSAP10619 480 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 DARSP14868 501 aaKnown RBP18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 FGFR4P22455 802 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 TDGQ13569 410 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 ZNF746Q6NUN9 644 aaPredicted RBP18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 CABP7Q86V35 215 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 SIX5Q8N196 739 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 RTP3Q9BQQ7 232 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 GABBR1Q9UBS5 961 aa18.64■□□□□ 0.57
APOBEC3F-203ENST00000476513 ZC3H11AO75152 810 aaKnown RBP eCLIP18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 PSAPP07602 524 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 TMOD1P28289 359 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 GPC3P51654 580 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 POLGP54098 1239 aaPredicted RBP18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 GIT2Q14161 759 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 CCDC149Q6ZUS6 474 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 OTOP3Q7RTS5 596 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 GPR149Q86SP6 731 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 DDX53Q86TM3 631 aaKnown RBP18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 SGMS1Q86VZ5 419 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 ZNF710Q8N1W2 664 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 BCL7CQ8WUZ0 217 aaPredicted RBP18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 CRYGNQ8WXF5 182 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 ZNF577Q9BSK1 485 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 KCNK12Q9HB15 430 aa18.63■□□□□ 0.57
APOBEC3F-203ENST00000476513 TBC1D22BQ9NU19 505 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms