RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
ABCF3-211ENST00000475728 PBX2P40425 430 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 RARRES1P49788 294 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 RABGGTBP53611 331 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 BECN1Q14457 450 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-211ENST00000475728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
ABCF3-211ENST00000475728 RHPN2Q8IUC4 686 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 ZNF579Q8NAF0 562 aaKnown RBP16.09■□□□□ 0.17
ABCF3-211ENST00000475728 MCPH1Q8NEM0 835 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 PIGOQ8TEQ8 1089 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 PPP1R16BQ96T49 567 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-211ENST00000475728 SEMA6BQ9H3T3 888 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 CDHR5Q9HBB8 845 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 ERVK-5Q9HDB9 667 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 ST3GAL5Q9UNP4 418 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 INSL6Q9Y581 213 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 COL4A3BPQ9Y5P4 624 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 EYSQ5T1H1 3165 aa16.09■□□□□ 0.17
ABCF3-211ENST00000475728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-211ENST00000475728 DENND3A2RUS2 1198 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 ARHGEF35A5YM69 484 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 ENPP3O14638 875 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 ZBTB39O15060 712 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 STAG3L1P0CL83 205 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.16
ABCF3-211ENST00000475728 DRP2Q13474 957 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 TFDP1Q14186 410 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
ABCF3-211ENST00000475728 PPP2R2DQ66LE6 453 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 POTEGQ6S5H5 508 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 TMEM40Q8WWA1 233 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 PRPF31Q8WWY3 499 aaKnown RBP16.08■□□□□ 0.16
ABCF3-211ENST00000475728 TOP1MTQ969P6 601 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 TMEM143Q96AN5 459 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 NT5C3AQ9H0P0 336 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 NKX2-4Q9H2Z4 354 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 ZNF576Q9H609 170 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 C1orf112Q9NSG2 853 aa16.08■□□□□ 0.16
ABCF3-211ENST00000475728 VWA3AA6NCI4 1184 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 ZSCAN20P17040 1043 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-211ENST00000475728 LONP1P36776 959 aaKnown RBP16.07■□□□□ 0.16
ABCF3-211ENST00000475728 LAMTOR4Q0VGL1 99 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 FAM228AQ86W67 206 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 CDK5RAP3Q96JB5 506 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 NLRP4Q96MN2 994 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 YME1L1Q96TA2 773 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 DNM3Q9UQ16 869 aa16.07■□□□□ 0.16
ABCF3-211ENST00000475728 YBX2Q9Y2T7 364 aaKnown RBP16.07■□□□□ 0.16
ABCF3-211ENST00000475728 LAMA2P24043 3122 aaKnown RBP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 A0A087WZ62 844 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 USO1O60763 962 aaKnown RBP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 CA3P07451 260 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 PHKA2P46019 1235 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 HTRA4P83105 476 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 PCBP1Q15365 356 aaKnown RBP eCLIP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 IL17AQ16552 155 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 FAM117BQ6P1L5 589 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 SRGAP1Q7Z6B7 1085 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 NPAS4Q8IUM7 802 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 ZNF396Q96N95 335 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 FDXACB1Q9BRP7 624 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 TTYH1Q9H313 450 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 DDX19AQ9NUU7 478 aaKnown RBP16.06■□□□□ 0.16
ABCF3-211ENST00000475728 RAPGEFL1Q9UHV5 662 aa16.06■□□□□ 0.16
ABCF3-211ENST00000475728 UPP2O95045 317 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 EYA4O95677 639 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 ZSCAN22P10073 491 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-211ENST00000475728 UBA7P41226 1012 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 HYIQ5T013 277 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 PADI6Q6TGC4 694 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 SLC24A5Q71RS6 500 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 CALML4Q96GE6 196 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 ZNF668Q96K58 619 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-211ENST00000475728 ADAM2Q99965 735 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 XPNPEP1Q9NQW7 623 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 CHST12Q9NRB3 414 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 RGS18Q9NS28 235 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-211ENST00000475728 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 LRFN2Q9ULH4 789 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-211ENST00000475728 EVPLQ92817 2033 aa16.05■□□□□ 0.16
ABCF3-211ENST00000475728 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 SRGAP2CP0DJJ0 459 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 MYOGP15173 224 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 CYP11B2P19099 503 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 COL9A1P20849 921 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 ARL2P36404 184 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 SARSP49591 514 aaKnown RBP16.04■□□□□ 0.16
ABCF3-211ENST00000475728 CATSPER4Q7RTX7 472 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 TMCO2Q7Z6W1 182 aaPredicted RBP16.04■□□□□ 0.16
ABCF3-211ENST00000475728 RTN4RL1Q86UN2 441 aaPredicted RBP16.04■□□□□ 0.16
ABCF3-211ENST00000475728 CABP7Q86V35 215 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms