RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 PRPF38AQ8NAV1 312 aaKnown RBP7.67□□□□□ -1.18
TM9SF3-204ENST00000475401 GFM2Q969S9 779 aaKnown RBP7.67□□□□□ -1.18
TM9SF3-204ENST00000475401 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
TM9SF3-204ENST00000475401 MYPNQ86TC9 1320 aa7.67□□□□□ -1.18
TM9SF3-204ENST00000475401 PHLDB1Q86UU1 1377 aa7.67□□□□□ -1.18
TM9SF3-204ENST00000475401 LCHNA4D1U4 455 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 B4GALT4O60513 344 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 OPHN1O60890 802 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 H2AFYO75367 372 aaKnown RBP7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 MAN2A1Q16706 1144 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 UBXN11Q5T124 520 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 CCDC62Q6P9F0 684 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 KLHDC10Q6PID8 442 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 CDYL2Q8N8U2 506 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 COG1Q8WTW3 980 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 JADE2Q9NQC1 790 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 POLR3BQ9NW08 1133 aaPredicted RBP7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 DENND2AQ9ULE3 1009 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 PCDHB6Q9Y5E3 794 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 NUMBLQ9Y6R0 609 aa7.66□□□□□ -1.18
TM9SF3-204ENST00000475401 A0A0A6YYJ9 748 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 PRSS38A1L453 326 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 OTOL1A6NHN0 477 aaPredicted RBP7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 ELL2O00472 640 aaPredicted RBP7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 DAPK3O43293 454 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 NRP2O60462 931 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 PRKD3O94806 890 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 STAT5BP51692 787 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 MANFP55145 182 aaKnown RBP7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 SCAND1P57086 179 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 FAM50AQ14320 339 aaKnown RBP7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 UGT8Q16880 541 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 UNQ6494/PRO21346Q6UXR6 183 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 ARHGEF18Q6ZSZ5 1173 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 MBD6Q96DN6 1003 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 WDR92Q96MX6 357 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 PITHD1Q9GZP4 211 aaPredicted RBP7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 USP18Q9UMW8 372 aa7.65□□□□□ -1.18
TM9SF3-204ENST00000475401 ZNF536O15090 1300 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 INHBBP09529 407 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 CLEC2LP0C7M8 214 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 ZNF888P0CJ79 500 aaPredicted RBP7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 CNR2P34972 360 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 GPR15P49685 360 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 CDKN1CP49918 316 aaPredicted RBP7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 MRE11P49959 708 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 NRG3P56975 720 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 ITKQ08881 620 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 PCOLCEQ15113 449 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 FSCN1Q16658 493 aaKnown RBP7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 ZBTB41Q5SVQ8 909 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 ERICH6BQ5W0A0 696 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 TRIM68Q6AZZ1 485 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 AMOTL1Q8IY63 956 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 CNTD1Q8N815 330 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 LPPQ93052 612 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 GPATCH3Q96I76 525 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 RAX2Q96IS3 184 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 MENTQ9BUN1 341 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 OR10A2Q9H208 303 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 HOMER2Q9NSB8 354 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 C14orf119Q9NWQ9 140 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 MAGEL2Q9UJ55 1249 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 INVSQ9Y283 1065 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
TM9SF3-204ENST00000475401 B4GALT3O60512 393 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 PFKMP08237 780 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 MTHFD2P13995 350 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 ENPP1P22413 925 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 CCDC178Q5BJE1 867 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 CT83Q5H943 113 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 GAB3Q8WWW8 586 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 GCDHQ92947 438 aaPredicted RBP7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 KRTAP4-12Q9BQ66 201 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 XYLT2Q9H1B5 865 aa7.63□□□□□ -1.19
TM9SF3-204ENST00000475401 LAMTOR5O43504 91 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 FSBPO95073 299 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 PPP2CBP62714 309 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 PPP2CAP67775 309 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 PPARAQ07869 468 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 SPIDRQ14159 915 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 PDCD1Q15116 288 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 ZNF827Q17R98 1081 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 AGBL4Q5VU57 503 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 SPOCD1Q6ZMY3 1216 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 USP30Q70CQ3 517 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 LARP4Q71RC2 724 aaKnown RBP eCLIP7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 OR14C36Q8NHC7 312 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 MTMR8Q96EF0 704 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 TEPSINQ96N21 525 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 KIAA1683Q9H0B3 1180 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 VTA1Q9NP79 307 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 DNAI1Q9UI46 699 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 NR2E1Q9Y466 385 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 SLC4A7Q9Y6M7 1214 aa7.62□□□□□ -1.19
TM9SF3-204ENST00000475401 ANTXR2P58335 489 aa7.61□□□□□ -1.19
TM9SF3-204ENST00000475401 EVA1CP58658 441 aa7.61□□□□□ -1.19
TM9SF3-204ENST00000475401 RAC3P60763 192 aa7.61□□□□□ -1.19
TM9SF3-204ENST00000475401 KLF1Q13351 362 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms