RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 DPYDQ12882 1025 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 CUL4BQ13620 913 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 MTFR1Q15390 333 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 ARSHQ5FYA8 562 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 RINT1Q6NUQ1 792 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 NLRP7Q8WX94 980 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 KAT2BQ92831 832 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 CEP170P1Q96L14 293 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
DDX39B-217ENST00000474961 SH2D3AQ9BRG2 576 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 RUSC1Q9BVN2 902 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 NIFKQ9BYG3 293 aaKnown RBP10.58□□□□□ -0.72
DDX39B-217ENST00000474961 TRIM9Q9C026 710 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 BLZF1Q9H2G9 400 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 RNPEPQ9H4A4 650 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 TUT1Q9H6E5 874 aaKnown RBP10.58□□□□□ -0.72
DDX39B-217ENST00000474961 SLC24A3Q9HC58 644 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 ZNF215Q9UL58 517 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-217ENST00000474961 NPHP3-ACAD11A0A0J9YXS1 232 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 HBP1O60381 514 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 LETM1O95202 739 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 F2P00734 622 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 MYL1P05976 194 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 CST5P28325 142 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 ASIC1P78348 528 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 PURAQ00577 322 aaKnown RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 LRRC41Q15345 812 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 TARBP2Q15633 366 aaKnown RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 KCNA10Q16322 511 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 ZSCAN23Q3MJ62 389 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 MTERF2Q49AM1 385 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 CCSAPQ6IQ19 270 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 CNNM4Q6P4Q7 775 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 RBM43Q6ZSC3 357 aaKnown RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 C1orf186Q6ZWK4 172 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 DYMQ7RTS9 669 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 RNF180Q86T96 592 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 SMARCE1Q969G3 411 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 DNAJC19Q96DA6 116 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 MTG1Q9BT17 334 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 GZF1Q9H116 711 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-217ENST00000474961 CYP26B1Q9NR63 512 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 PCDHA5Q9Y5H7 936 aa10.57□□□□□ -0.72
DDX39B-217ENST00000474961 ZBTB42B2RXF5 422 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 HAS3O00219 553 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 KLRC4O43908 158 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 USO1O60763 962 aaKnown RBP10.56□□□□□ -0.72
DDX39B-217ENST00000474961 SMC2O95347 1197 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 RPN1P04843 607 aaKnown RBP10.56□□□□□ -0.72
DDX39B-217ENST00000474961 KRT18P05783 430 aaKnown RBP10.56□□□□□ -0.72
DDX39B-217ENST00000474961 INSRRP14616 1297 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 SARSP49591 514 aaKnown RBP10.56□□□□□ -0.72
DDX39B-217ENST00000474961 CHMP4BP1P59074 171 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 RAD51AP2Q09MP3 1159 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 GIT2Q14161 759 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 ZNF484Q5JVG2 852 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 PCSK9Q8NBP7 692 aaKnown RBP10.56□□□□□ -0.72
DDX39B-217ENST00000474961 ARMC5Q96C12 935 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 ZNF333Q96JL9 665 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 DEFB118Q96PH6 123 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 CEP89Q96ST8 783 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 RNF208Q9H0X6 261 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 PDLIM7Q9NR12 457 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 KCND2Q9NZV8 630 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 PPME1Q9Y570 386 aa10.56□□□□□ -0.72
DDX39B-217ENST00000474961 COL1A2P08123 1366 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 PVALEFA0A1B0GWK0 134 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 SYCE3A1L190 88 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 BIN1O00499 593 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 DGAT1O75907 488 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 ASGR1P07306 291 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 CFHP08603 1231 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 IDEP14735 1019 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 GUCY2CP25092 1073 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 KIAA0753Q2KHM9 967 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 NT5DC1Q5TFE4 455 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 CXCL17Q6UXB2 119 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 UNC13DQ70J99 1090 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 MAEAQ7L5Y9 396 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 ARRDC4Q8NCT1 418 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 SPATA20Q8TB22 786 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 PPP1R13LQ8WUF5 828 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 TRAPPC12Q8WVT3 735 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 GSDMAQ96QA5 445 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 REEP2Q9BRK0 252 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
DDX39B-217ENST00000474961 KATNAL1Q9BW62 490 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 DHX33Q9H6R0 707 aaKnown RBP10.55□□□□□ -0.72
DDX39B-217ENST00000474961 POLD4Q9HCU8 107 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 TUBE1Q9UJT0 475 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
DDX39B-217ENST00000474961 RSPH10B2B2RC85 870 aa10.54□□□□□ -0.72
DDX39B-217ENST00000474961 TRIM66O15016 1216 aa10.54□□□□□ -0.72
DDX39B-217ENST00000474961 HIP1RO75146 1068 aa10.54□□□□□ -0.72
DDX39B-217ENST00000474961 MAFO75444 373 aaPredicted RBP10.54□□□□□ -0.72
DDX39B-217ENST00000474961 RSPH10BP0C881 870 aa10.54□□□□□ -0.72
DDX39B-217ENST00000474961 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
DDX39B-217ENST00000474961 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms