RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 A0A087WWV3 80 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 ABHD14A-ACY1A0A1B0GW23 586 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 M0QZ92 97 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 EFCAB14O75071 495 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 EIF4BP23588 611 aaKnown RBP18.85■□□□□ 0.61
SCAF11-206ENST00000474828 NLRP11P59045 1033 aaKnown RBP18.85■□□□□ 0.61
SCAF11-206ENST00000474828 STK38Q15208 465 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 PADI6Q6TGC4 694 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 DEFB128Q7Z7B8 93 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 SYT2Q8N9I0 419 aaPredicted RBP18.85■□□□□ 0.61
SCAF11-206ENST00000474828 MCPH1Q8NEM0 835 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 PRPF31Q8WWY3 499 aaKnown RBP18.85■□□□□ 0.61
SCAF11-206ENST00000474828 EPSTI1Q96J88 318 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 CLIC6Q96NY7 704 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 MTRQ99707 1265 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 NFKBIZQ9BYH8 718 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 BHMT2Q9H2M3 363 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 ATP6V0A4Q9HBG4 840 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 BLOC1S4Q9NUP1 217 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 SUCLA2Q9P2R7 463 aaPredicted RBP18.85■□□□□ 0.61
SCAF11-206ENST00000474828 E9PMD0 336 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 CUTAO60888 179 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 ACTN1P12814 892 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 SLC12A3P55017 1021 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 TMEM62Q0P6H9 643 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 MXD4Q14582 209 aaPredicted RBP18.84■□□□□ 0.61
SCAF11-206ENST00000474828 KIZQ2M2Z5 673 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 C1orf186Q6ZWK4 172 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 PSPC1Q8WXF1 523 aaKnown RBP18.84■□□□□ 0.61
SCAF11-206ENST00000474828 SEPT8Q92599 483 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 SYMPKQ92797 1274 aaKnown RBP18.84■□□□□ 0.61
SCAF11-206ENST00000474828 IFIH1Q9BYX4 1025 aaKnown RBP18.84■□□□□ 0.61
SCAF11-206ENST00000474828 IFT122Q9HBG6 1241 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 ERVK-5Q9HDB9 667 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 KCND2Q9NZV8 630 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 CXXC1Q9P0U4 656 aaPredicted RBP18.84■□□□□ 0.61
SCAF11-206ENST00000474828 AKT3Q9Y243 479 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 COL4A3BPQ9Y5P4 624 aa18.84■□□□□ 0.61
SCAF11-206ENST00000474828 ARHGEF35A5YM69 484 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 GHRP10912 638 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 DARSP14868 501 aaKnown RBP18.83■□□□□ 0.6
SCAF11-206ENST00000474828 GUCY2CP25092 1073 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 KRT85P78386 507 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 CRIPAKQ8N1N5 446 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 PHOSPHO2Q8TCD6 241 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 LEO1Q8WVC0 666 aaPredicted RBP18.83■□□□□ 0.6
SCAF11-206ENST00000474828 TMEM143Q96AN5 459 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 CALML4Q96GE6 196 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 TIPINQ9BVW5 301 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 PADI3Q9ULW8 664 aa18.83■□□□□ 0.6
SCAF11-206ENST00000474828 NOC2LQ9Y3T9 749 aaKnown RBP18.83■□□□□ 0.6
SCAF11-206ENST00000474828 LAMTOR4Q0VGL1 99 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 IKBKEQ14164 716 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 KARSQ15046 597 aaKnown RBP18.82■□□□□ 0.6
SCAF11-206ENST00000474828 NAALADL2Q58DX5 795 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 RINT1Q6NUQ1 792 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 SHC4Q6S5L8 630 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 KCNN1Q92952 543 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 OSMRQ99650 979 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 SCAND2PQ9GZW5 306 aaPredicted RBP18.82■□□□□ 0.6
SCAF11-206ENST00000474828 MTIF3Q9H2K0 278 aaKnown RBP18.82■□□□□ 0.6
SCAF11-206ENST00000474828 TMX1Q9H3N1 280 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 DAXXQ9UER7 740 aaPredicted RBP18.82■□□□□ 0.6
SCAF11-206ENST00000474828 PCDHA7Q9UN72 937 aa18.82■□□□□ 0.6
SCAF11-206ENST00000474828 USO1O60763 962 aaKnown RBP18.81■□□□□ 0.6
SCAF11-206ENST00000474828 PLCG1P19174 1290 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 GLRA2P23416 452 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 WDR5P61964 334 aaKnown RBP18.81■□□□□ 0.6
SCAF11-206ENST00000474828 MAPK7Q13164 816 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 PCBP1Q15365 356 aaKnown RBP eCLIP18.81■□□□□ 0.6
SCAF11-206ENST00000474828 ODR4Q5SWX8 454 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 OTOP2Q7RTS6 562 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 FAM228AQ86W67 206 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 DAW1Q8N136 415 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 RNPC3Q96LT9 517 aaKnown RBP18.81■□□□□ 0.6
SCAF11-206ENST00000474828 FTHL17Q9BXU8 183 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 STK17AQ9UEE5 414 aa18.81■□□□□ 0.6
SCAF11-206ENST00000474828 RBM19Q9Y4C8 960 aaKnown RBP18.81■□□□□ 0.6
SCAF11-206ENST00000474828 A0A087WZ62 844 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 A0A087X0B3 334 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 FAM237AA0A1B0GTK4 181 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.8■□□□□ 0.6
SCAF11-206ENST00000474828 GPR182O15218 404 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 RPS6KA5O75582 802 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 PLA2G4BP0C869 781 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 CD52P31358 61 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 PTENP60484 403 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 SMAD3P84022 425 aaKnown RBP18.8■□□□□ 0.6
SCAF11-206ENST00000474828 CAPSQ13938 189 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 DSC3Q14574 896 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
SCAF11-206ENST00000474828 ARSHQ5FYA8 562 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 SPECC1Q5M775 1068 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 FOXD4L3Q6VB84 417 aaPredicted RBP18.8■□□□□ 0.6
SCAF11-206ENST00000474828 SRGAP1Q7Z6B7 1085 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 RTN4RL1Q86UN2 441 aaPredicted RBP18.8■□□□□ 0.6
SCAF11-206ENST00000474828 KSR1Q8IVT5 923 aa18.8■□□□□ 0.6
SCAF11-206ENST00000474828 ASAP3Q8TDY4 903 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms