RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RUFY2Q8WXA3 655 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 BAP1Q92560 729 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 FATE1Q969F0 183 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 MPHOSPH8Q99549 860 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 UQCC2Q9BRT2 126 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 ISCA1Q9BUE6 129 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RASSF4Q9H2L5 321 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 TUBA8Q9NY65 449 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 IL1RAPL1Q9NZN1 696 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 THEGQ9P2T0 379 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 HPCAL4Q9UM19 191 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 ADAMTS8Q9UP79 889 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 KCNH4Q9UQ05 1017 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 GPR52Q9Y2T5 361 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 SNX8Q9Y5X2 465 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 ZNF804BA4D1E1 1349 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 LTBP3Q9NS15 1303 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 C17orf113A0A1B0GUU1 675 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 CCDC69A6NI79 296 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 H0Y626 953 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RTN2O75298 545 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 FAM13AO94988 1023 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 GNRH1P01148 92 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RPSAP08865 295 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RHOXF2BP0C7M4 288 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 HADHAP40939 763 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 KCNJ6P48051 423 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 CCNHP51946 323 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 HDAC4P56524 1084 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RIPK4P57078 832 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 UBXN1Q04323 297 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 TRIM28Q13263 835 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 MINDY4Q4G0A6 757 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 C6orf118Q5T5N4 469 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 METTL11BQ5VVY1 283 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 ENOSF1Q7L5Y1 443 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 KDELC2Q7Z4H8 507 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 NECAB2Q7Z6G3 386 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 ZNF619Q8N2I2 560 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 TTC39CQ8N584 583 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 NSUN6Q8TEA1 469 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 KCTD13Q8WZ19 329 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 COG3Q96JB2 828 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RHOXF2Q9BQY4 288 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 EDEM3Q9BZQ6 932 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 CCDC8Q9H0W5 538 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 PPP1R14DQ9NXH3 145 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 CCDC39Q9UFE4 941 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 GJD2Q9UKL4 321 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 RIMKLBQ9ULI2 386 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 USP47Q96K76 1375 aa6.68□□□□□ -1.34
SMARCE1-208ENST00000474246 CGNL1Q0VF96 1302 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 ANKARQ7Z5J8 1434 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 AP3B1O00203 1094 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 CACNB4O00305 520 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 IRS4O14654 1257 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 DAB1O75553 588 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 DGKIO75912 1065 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 USP1O94782 785 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 EPN2O95208 641 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 F12P00748 615 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 PSMA4P25789 261 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 ELF1P32519 619 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 IFIT5Q13325 482 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 GBX1Q14549 363 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 LBRQ14739 615 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 ZNF771Q7L3S4 317 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 NINJ1Q92982 152 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 TTC17Q96AE7 1141 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 ZNF333Q96JL9 665 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 SEC62Q99442 399 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 PLVAPQ9BX97 442 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 NSRP1Q9H0G5 558 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 SYNCQ9H7C4 482 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 SH2B1Q9NRF2 756 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 ITGB1BP2Q9UKP3 347 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 CARD8Q9Y2G2 431 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 WTIPA6NIX2 430 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 PDPK1O15530 556 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 USO1O60763 962 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 PALMO75781 387 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 CCNYL3P0C7X3 344 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 MMP16P51512 607 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 PMS1P54277 932 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 AK2P54819 239 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 BNIP1Q12981 228 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 EMC10Q5UCC4 262 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 LEKR1Q6ZMV7 388 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 TPH2Q8IWU9 490 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 CBARPQ8N350 705 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 PNMA1Q8ND90 353 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 RIN3Q8TB24 985 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 ANKRD7Q92527 254 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 MFSD14AQ96MC6 490 aa6.67□□□□□ -1.34
SMARCE1-208ENST00000474246 GPATCH1Q9BRR8 931 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms