RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 LMF1Q96S06 567 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 ELF4Q99607 663 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-209ENST00000473470 THG1LQ9NWX6 298 aaKnown RBP6.3□□□□□ -1.4
CNOT4-209ENST00000473470 KCMF1Q9P0J7 381 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 CFTRP13569 1480 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 ST20-MTHFSA0A0A6YYL1 179 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 FAM83GA6ND36 823 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 ARHGAP6O43182 974 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 MYCLP1P12525 358 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-209ENST00000473470 SLC9A1P19634 815 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 PHC1P78364 1004 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 BMP8AQ7Z5Y6 402 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 PRRT2Q7Z6L0 340 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-209ENST00000473470 TUBGCP5Q96RT8 1024 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 RBM15Q96T37 977 aaKnown RBP eCLIP6.29□□□□□ -1.4
CNOT4-209ENST00000473470 SMPD4Q9NXE4 827 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 PPP4R1LQ9P1A2 415 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 SAE1Q9UBE0 346 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-209ENST00000473470 OAZ3Q9UMX2 235 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 APOBEC2Q9Y235 224 aaKnown RBP6.29□□□□□ -1.4
CNOT4-209ENST00000473470 NR2E1Q9Y466 385 aa6.29□□□□□ -1.4
CNOT4-209ENST00000473470 CEP170Q5SW79 1584 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 PEG3Q9GZU2 1588 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 ADRB1P08588 477 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 PCOLCEQ15113 449 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 DHCR24Q15392 516 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 TRIM68Q6AZZ1 485 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 KLHDC10Q6PID8 442 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 ZNF662Q6ZS27 426 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 USP30Q70CQ3 517 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 CHTF18Q8WVB6 975 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 USP7Q93009 1102 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 GFM2Q969S9 779 aaKnown RBP6.28□□□□□ -1.4
CNOT4-209ENST00000473470 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-209ENST00000473470 LOXL4Q96JB6 756 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 MTFR1LQ9H019 292 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 KIAA1683Q9H0B3 1180 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 POLR3BQ9NW08 1133 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-209ENST00000473470 PRKAB1Q9Y478 270 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 SBNO2Q9Y2G9 1366 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 KIF21BO75037 1637 aa6.28□□□□□ -1.4
CNOT4-209ENST00000473470 PCF11O94913 1555 aaKnown RBP6.27□□□□□ -1.41
CNOT4-209ENST00000473470 WIZO95785 1651 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 A0A087X0B3 334 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 H2AFYO75367 372 aaKnown RBP6.27□□□□□ -1.41
CNOT4-209ENST00000473470 NCLP19338 710 aaKnown RBP6.27□□□□□ -1.41
CNOT4-209ENST00000473470 PTX3P26022 381 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-209ENST00000473470 STAT3P40763 770 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 RGS3P49796 1198 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 MRE11P49959 708 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 GYS2P54840 703 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 SEPT7Q16181 437 aaKnown RBP6.27□□□□□ -1.41
CNOT4-209ENST00000473470 KIAA1841Q6NSI8 718 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 NXPE1Q8N323 547 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 CHST13Q8NET6 341 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 ZMAT4Q9H898 229 aa6.27□□□□□ -1.41
CNOT4-209ENST00000473470 PUF60Q9UHX1 559 aaKnown RBP6.27□□□□□ -1.41
CNOT4-209ENST00000473470 PPRC1Q5VV67 1664 aaKnown RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 PMS2P1A4D2B8 440 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 ANKRD62A6NC57 917 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 LSP1P33241 339 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 MAGEA10P43363 369 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 SELENOPP49908 381 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 STAT5BP51692 787 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 ADCY2Q08462 1091 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 MYBPC3Q14896 1274 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 PCBP1Q15365 356 aaKnown RBP eCLIP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 HS1BP3Q53T59 392 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 ESPNLQ6ZVH7 1005 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 FILIP1Q7Z7B0 1213 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 THNSL2Q86YJ6 484 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 GIMAP8Q8ND71 665 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 CHAC2Q8WUX2 184 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 PUS7Q96PZ0 661 aaKnown RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 LRRC37BQ96QE4 947 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 CDK5RAP1Q96SZ6 601 aaKnown RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 SSBP3Q9BWW4 388 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 PITHD1Q9GZP4 211 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 HAPLN2Q9GZV7 340 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 WNT8AQ9H1J5 351 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 SEMA4AQ9H3S1 761 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 CAAP1Q9H8G2 361 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 CDC42EP3Q9UKI2 254 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 FAM184BQ9ULE4 1060 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 SYNPO2Q9UMS6 1093 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 TCAF1Q9Y4C2 921 aa6.26□□□□□ -1.41
CNOT4-209ENST00000473470 MED1Q15648 1581 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-209ENST00000473470 TOP2BQ02880 1626 aa6.25□□□□□ -1.41
CNOT4-209ENST00000473470 ULK1O75385 1050 aa6.25□□□□□ -1.41
CNOT4-209ENST00000473470 FKBP9O95302 570 aa6.25□□□□□ -1.41
CNOT4-209ENST00000473470 CPEP16870 476 aa6.25□□□□□ -1.41
CNOT4-209ENST00000473470 CR2P20023 1033 aa6.25□□□□□ -1.41
CNOT4-209ENST00000473470 RPS19P39019 145 aaKnown RBP6.25□□□□□ -1.41
CNOT4-209ENST00000473470 ADCYAP1R1P41586 468 aa6.25□□□□□ -1.41
CNOT4-209ENST00000473470 SMAD3P84022 425 aaKnown RBP6.25□□□□□ -1.41
CNOT4-209ENST00000473470 RNF151Q2KHN1 245 aa6.25□□□□□ -1.41
CNOT4-209ENST00000473470 CT47A1Q5JQC4 288 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms