RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 CNTFP26441 200 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 MAN2A2P49641 1150 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 MRE11P49959 708 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 SH3BGRP55822 239 aaPredicted RBP6.75□□□□□ -1.33
RTF1-203ENST00000473214 GABREP78334 506 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 FAPQ12884 760 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 HYAL2Q12891 473 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 MEA1Q16626 185 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 HSP90B2PQ58FF3 399 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 PIK3R6Q5UE93 754 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 FAM205BPQ63HN1 556 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 CEP135Q66GS9 1140 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 TRIM68Q6AZZ1 485 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 GALNT17Q6IS24 598 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 TXNDC11Q6PKC3 985 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 KDELC2Q7Z4H8 507 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 HEATR4Q86WZ0 1026 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 SPATA17Q96L03 361 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 MYRFLQ96LU7 910 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 DBNDD2Q9BQY9 259 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 PHAXQ9H814 394 aaKnown RBP6.75□□□□□ -1.33
RTF1-203ENST00000473214 GTF3C4Q9UKN8 822 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 BLOC1S6Q9UL45 172 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 INVSQ9Y283 1065 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 LRP6O75581 1613 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 SYCP2Q9BX26 1530 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 MED14O60244 1454 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 ZNF891A8MT65 544 aaPredicted RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 ENC1O14682 589 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 FSCN2O14926 492 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 PRODHO43272 600 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 GRIN3BO60391 1043 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 SMNDC1O75940 238 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTF1-203ENST00000473214 FKBP9O95302 570 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 HSPA4LO95757 839 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 CCDC175P0C221 793 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 STMN1P16949 149 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 ADCYAP1R1P41586 468 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 PRIM2P49643 509 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 SEMA5AQ13591 1074 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 MOGSQ13724 837 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 ZYXQ15942 572 aaKnown RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 MFSD6Q6ZSS7 791 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 FKBP9P1Q75LS8 142 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 OTUD6AQ7L8S5 288 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 GALNTL5Q7Z4T8 443 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 DPP9Q86TI2 863 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 KLHL23Q8NBE8 558 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 CCDC191Q8NCU4 936 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 SSH3Q8TE77 659 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 JAKMIP1Q96N16 626 aaKnown RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 PAIP2Q9BPZ3 127 aaKnown RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 DESI2Q9BSY9 194 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 LACRTQ9GZZ8 138 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 CCDC68Q9H2F9 335 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 GRPEL1Q9HAV7 217 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 OLA1Q9NTK5 396 aaKnown RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 GGA3Q9NZ52 723 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 WDR35Q9P2L0 1181 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 LRP2BPQ9P2M1 347 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 AASSQ9UDR5 926 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 TROQ12816 1431 aaPredicted RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 ROBO1Q9Y6N7 1651 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 LTBP3Q9NS15 1303 aa6.74□□□□□ -1.33
RTF1-203ENST00000473214 INO80Q9ULG1 1556 aaPredicted RBP6.74□□□□□ -1.33
RTF1-203ENST00000473214 CDC42BPAQ5VT25 1732 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 DEPDC5O75140 1603 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 ATP7AQ04656 1500 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 PCDHGA12O60330 932 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 EFCAB14O75071 495 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 PAGE1O75459 146 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 WNT11O96014 354 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 CSTBP04080 98 aaKnown RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 POLBP06746 335 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 PABPC1P11940 636 aaKnown RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 MYCLP12524 364 aaPredicted RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 TNFSF4P23510 183 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 AKAP5P24588 427 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 DRG2P55039 364 aaKnown RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 DCAF7P61962 342 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 KRT85P78386 507 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 CDC16Q13042 620 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 ACAP2Q15057 778 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 CLUL1Q15846 466 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 LRRFIP1Q32MZ4 808 aaKnown RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 GGT6Q6P531 493 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 DARS2Q6PI48 645 aaKnown RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 NSMFQ6X4W1 530 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 UNC5AQ6ZN44 842 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 FAM47EQ6ZV65 393 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 TMTC1Q8IUR5 882 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 NXPE1Q8N323 547 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 TMEM102Q8N9M5 508 aaPredicted RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 MIGA1Q8NAN2 632 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 LILRB1Q8NHL6 650 aaPredicted RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 KCTD13Q8WZ19 329 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 DPF3Q92784 378 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 WNK4Q96J92 1243 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 NECAB3Q96P71 396 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms