RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 SYNPO2Q9UMS6 1093 aa5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 CTDP1Q9Y5B0 961 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 RBM8AQ9Y5S9 174 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 WDR33Q9C0J8 1336 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-207ENST00000471701 OVOL3O00110 214 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 MAFGO15525 162 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 OPA1O60313 960 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 RAPGEF3O95398 923 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 ASLP04424 464 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 ADCY7P51828 1080 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 NFE2L2Q16236 605 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 FNDC3BQ53EP0 1204 aaKnown RBP5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 TTC38Q5R3I4 469 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 ZCCHC8Q6NZY4 707 aaKnown RBP5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 UBE2R2Q712K3 238 aaPredicted RBP5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 RTN4RL1Q86UN2 441 aaPredicted RBP5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 NME9Q86XW9 330 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 TMPRSS6Q8IU80 811 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 MAML3Q96JK9 1138 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 TUBGCP5Q96RT8 1024 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 TRIM8Q9BZR9 551 aa5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 REXO2Q9Y3B8 237 aaKnown RBP5.19□□□□□ -1.58
PRPF40A-207ENST00000471701 UBA6A0AVT1 1052 aaPredicted RBP5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 PTPDC1A2A3K4 754 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 H7C1D1 291 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 ADH4P08319 380 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 MAKP20794 623 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 RGS3P49796 1198 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 BPIFB4P59827 614 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 DPTQ07507 201 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 CNGB1Q14028 1251 aaPredicted RBP5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 ACAP1Q15027 740 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 CRB2Q5IJ48 1285 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 IGFL4Q6B9Z1 124 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 SLFN12LQ6IEE8 588 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 ZNF662Q6ZS27 426 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 BCL6BQ8N143 479 aaPredicted RBP5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 ANKRD53Q8N9V6 530 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 CHST14Q8NCH0 376 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 CACTINQ8WUQ7 758 aaKnown RBP5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 NEU4Q8WWR8 484 aaPredicted RBP5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 RPGRQ92834 1020 aaKnown RBP5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 MIEF2Q96C03 454 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 CHFRQ96EP1 664 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 KCMF1Q9P0J7 381 aa5.18□□□□□ -1.58
PRPF40A-207ENST00000471701 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 C2orf78A6NCI8 922 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 PRLP01236 227 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 STAT3P40763 770 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 MECP2P51608 486 aaKnown RBP5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 BCAR1P56945 870 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 ANTXR2P58335 489 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 PURAQ00577 322 aaKnown RBP5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 ADCY1Q08828 1119 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 RRP1BQ14684 758 aaKnown RBP5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 PRAMEF9Q5VWM5 478 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 SPTY2D1Q68D10 685 aaPredicted RBP5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 KRT40Q6A162 431 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 FAM111BQ6SJ93 734 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 AMER2Q8N7J2 671 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 CLUHP3Q96NS8 147 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 CEP89Q96ST8 783 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 OSBPL2Q9H1P3 480 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 MMRN2Q9H8L6 949 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 C11orf21Q9P2W6 132 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 RCAN3Q9UKA8 241 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 CDK11AQ9UQ88 783 aaPredicted RBP5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 SH3BP1Q9Y3L3 701 aa5.17□□□□□ -1.58
PRPF40A-207ENST00000471701 GLRX3O76003 335 aaKnown RBP5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 TCIRG1Q13488 830 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 TIGD7Q6NT04 549 aaPredicted RBP5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 GAREM2Q75VX8 874 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 KIAA1958Q8N8K9 716 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 PLA2G15Q8NCC3 412 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 MRFAP1L1Q96HT8 127 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 DYDC2Q96IM9 177 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 WDR92Q96MX6 357 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 DNAJC2Q99543 621 aaKnown RBP5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 TCF25Q9BQ70 676 aa5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 TNPO3Q9Y5L0 923 aaKnown RBP5.16□□□□□ -1.58
PRPF40A-207ENST00000471701 UBE2QL1A1L167 161 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 TRAF5O00463 557 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 DVL2O14641 736 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 MFAP3LO75121 409 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 PEX11BO96011 259 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 INHBCP55103 352 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 SAFB2Q14151 953 aaKnown RBP eCLIP5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 GAGE13Q4V321 117 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 PIK3R6Q5UE93 754 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 OR5AN1Q8NGI8 311 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 C16orf92Q96LL3 132 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 GPHA2Q96T91 129 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 IFT57Q9NWB7 429 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 ZKSCAN5Q9Y2L8 839 aa5.15□□□□□ -1.59
PRPF40A-207ENST00000471701 A0A087X1B8 175 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 APOL3O95236 402 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 SLC9A1P19634 815 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 MAN2A2P49641 1150 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 ADCY2Q08462 1091 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms