RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ADCY7P51828 1080 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 ROM1Q03395 351 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 FOXL1Q12952 345 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 ZNF174Q15697 407 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 SPDYAQ5MJ70 313 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 PALM2Q8IXS6 379 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 RTKN2Q8IZC4 609 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 Q8N1X5 172 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 TUBGCP5Q96RT8 1024 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 MYL10Q9BUA6 226 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 PITHD1Q9GZP4 211 aaPredicted RBP7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 POFUT1Q9H488 388 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 SPTLC3Q9NUV7 552 aa7.29□□□□□ -1.24
PRPF40A-206ENST00000471167 PRPF6O94906 941 aaKnown RBP7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 ATP2C1P98194 919 aaPredicted RBP7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 PLEKHG4Q58EX7 1191 aa7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 MAMDC4Q6UXC1 1216 aa7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 WDR48Q8TAF3 677 aa7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 SH3RF3Q8TEJ3 882 aaPredicted RBP7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 MFSD3Q96ES6 412 aa7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 GPHA2Q96T91 129 aa7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 DEF6Q9H4E7 631 aa7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 TESMINQ9Y4I5 508 aa7.28□□□□□ -1.24
PRPF40A-206ENST00000471167 ADCYAP1R1P41586 468 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 SELENOPP49908 381 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 MEOX1P50221 254 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 PRAMEF9Q5VWM5 478 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 NOP9Q86U38 636 aaKnown RBP7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 EFHBQ8N7U6 833 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 E2F7Q96AV8 911 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 C12orf65Q9H3J6 166 aaKnown RBP7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 KCMF1Q9P0J7 381 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 DENND2AQ9ULE3 1009 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 VWA7Q9Y334 891 aa7.27□□□□□ -1.25
PRPF40A-206ENST00000471167 A0A0A6YYJ9 748 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 SLC26A4O43511 780 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 LRRC32Q14392 662 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 ZBTB41Q5SVQ8 909 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 SPTY2D1Q68D10 685 aaPredicted RBP7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 KLHDC10Q6PID8 442 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 CLEC14AQ86T13 490 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 OR14A2Q96R54 314 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 IFT57Q9NWB7 429 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 PLA2G3Q9NZ20 509 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 SAE1Q9UBE0 346 aaPredicted RBP7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 PUF60Q9UHX1 559 aaKnown RBP7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 FAM184BQ9ULE4 1060 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 PLAAQ9Y263 795 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 ZKSCAN5Q9Y2L8 839 aa7.26□□□□□ -1.25
PRPF40A-206ENST00000471167 TLDC2A0PJX2 215 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 PMS2P1A4D2B8 440 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 HNRNPLP14866 589 aaKnown RBP eCLIP7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 ACO1P21399 889 aaKnown RBP7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 COMTP21964 271 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 GYS2P54840 703 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 DGKDQ16760 1214 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 ZNF568Q3ZCX4 644 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 ADGRE4PQ86SQ3 457 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 ZNF808Q8N4W9 903 aaPredicted RBP7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 EDAQ92838 391 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 GPR101Q96P66 508 aaPredicted RBP7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 PRDM12Q9H4Q4 367 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 USP35Q9P2H5 1018 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 TMPRSS11EQ9UL52 423 aa7.25□□□□□ -1.25
PRPF40A-206ENST00000471167 GAS7O60861 476 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 ADCY2Q08462 1091 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 ADCY1Q08828 1119 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 MAP3K12Q12852 859 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 KIAA1841Q6NSI8 718 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 BMP8AQ7Z5Y6 402 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 NME9Q86XW9 330 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 PHYKPLQ8IUZ5 450 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 LYSMD2Q8IV50 215 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 SHCBP1Q8NEM2 672 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 PPP1R14CQ8TAE6 165 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 DYDC2Q96IM9 177 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 ADOQ96SZ5 270 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 ZNF747Q9BV97 191 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 MTG2Q9H4K7 406 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 DNAI1Q9UI46 699 aa7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 RBM8AQ9Y5S9 174 aaKnown RBP7.24□□□□□ -1.25
PRPF40A-206ENST00000471167 MUSKO15146 869 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 OPHN1O60890 802 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 MSX2P35548 267 aaPredicted RBP7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 RIN1Q13671 783 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 TERF2Q15554 542 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 STRA8Q7Z7C7 330 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 RNF180Q86T96 592 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 THNSL2Q86YJ6 484 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 PPM1KQ8N3J5 372 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 RABGGTAQ92696 567 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 TCAF1Q9Y4C2 921 aa7.23□□□□□ -1.25
PRPF40A-206ENST00000471167 PDE8AO60658 829 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 MYCLP1P12525 358 aaPredicted RBP7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 ID4P47928 161 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 LSSP48449 732 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 BCAR1P56945 870 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 PHC1P78364 1004 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 IGFL4Q6B9Z1 124 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 POLNQ7Z5Q5 900 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms