RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ELNP15502 786 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 CAPN2P17655 700 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 LIG1P18858 919 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 ERCC3P19447 782 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 MAPK4P31152 587 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 TXKP42681 527 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 NDUFA8P51970 172 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 FCGRTP55899 365 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 PSMA6P60900 246 aaKnown RBP7.44□□□□□ -1.22
VAMP3-202ENST00000470357 BAATQ14032 418 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-202ENST00000470357 UBAP2LQ14157 1087 aaKnown RBP7.44□□□□□ -1.22
VAMP3-202ENST00000470357 ZRSR1Q15695 479 aaKnown RBP7.44□□□□□ -1.22
VAMP3-202ENST00000470357 PRR16Q569H4 304 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 KRT79Q5XKE5 535 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 HAUS3Q68CZ6 603 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 SLC30A10Q6XR72 485 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 NLRX1Q86UT6 975 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 CEP57L1Q8IYX8 460 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 IGSF22Q8N9C0 903 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 IQUBQ8NA54 791 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 ZSCAN1Q8NBB4 408 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 ENGASEQ8NFI3 743 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 RASSF8Q8NHQ8 419 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 TBC1D5Q92609 795 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 GPRASP2Q96D09 838 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 CALML4Q96GE6 196 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 CLIC6Q96NY7 704 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 DEFB118Q96PH6 123 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 RIT2Q99578 217 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 MXRA8Q9BRK3 442 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 SDF4Q9BRK5 362 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 PDCD2LQ9BRP1 358 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 WDR11Q9BZH6 1224 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 CLSTN2Q9H4D0 955 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 TTC12Q9H892 705 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-202ENST00000470357 MAGEF1Q9HAY2 307 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 KCNMB3Q9NPA1 279 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 A1CFQ9NQ94 594 aaKnown RBP7.44□□□□□ -1.22
VAMP3-202ENST00000470357 SLC5A4Q9NY91 659 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 ZDHHC3Q9NYG2 299 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 LRWD1Q9UFC0 647 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 NOVA2Q9UNW9 492 aaKnown RBP7.44□□□□□ -1.22
VAMP3-202ENST00000470357 RIPK3Q9Y572 518 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 KDM3AQ9Y4C1 1321 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 WDR81Q562E7 1941 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 MGAMO43451 1857 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 MYH9P35579 1960 aaKnown RBP7.43□□□□□ -1.22
VAMP3-202ENST00000470357 IGLV3-22A0A075B6J6 115 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 EML1O00423 815 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 SLC37A4O43826 429 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 CNMDO75829 334 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 CAVIN2O95810 425 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 TFRCP02786 760 aaKnown RBP7.43□□□□□ -1.22
VAMP3-202ENST00000470357 MYL1P05976 194 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 EIF2AK2P19525 551 aaKnown RBP7.43□□□□□ -1.22
VAMP3-202ENST00000470357 MUTP22033 750 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 ZNF445P59923 1031 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 SNW1Q13573 536 aaKnown RBP7.43□□□□□ -1.22
VAMP3-202ENST00000470357 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
VAMP3-202ENST00000470357 PGM5Q15124 567 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 STXBP2Q15833 593 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 KCNV1Q6PIU1 500 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 PLA2G4DQ86XP0 818 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 ETNPPLQ8TBG4 499 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 CDK5RAP3Q96JB5 506 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 TAAR1Q96RJ0 339 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 MMP19Q99542 508 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 ZCCHC2Q9C0B9 1178 aaKnown RBP7.43□□□□□ -1.22
VAMP3-202ENST00000470357 LRRC27Q9C0I9 530 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 NT5C3AQ9H0P0 336 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 TMEM60Q9H2L4 133 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 TBC1D22BQ9NU19 505 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 TMEM63CQ9P1W3 806 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 STK17AQ9UEE5 414 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-202ENST00000470357 UBIAD1Q9Y5Z9 338 aa7.43□□□□□ -1.22
VAMP3-202ENST00000470357 MCM3APO60318 1980 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 LRRC37A2A6NM11 1700 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 ASB14A6NK59 587 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 FAM86B1E9PN63 330 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 IPO5O00410 1097 aaKnown RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 POLR2DO15514 142 aaKnown RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 EDIL3O43854 480 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 GAS7O60861 476 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 EIF3JO75822 258 aaKnown RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 FAM86B2P0C5J1 330 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 SLFN14P0C7P3 912 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 CCDC192P0DO97 292 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 MYCLP12524 364 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 TAL1P17542 331 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 STAT6P42226 847 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 TECP42680 631 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 MAGEA10P43363 369 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 ALDH5A1P51649 535 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 AMPD3Q01432 767 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 PPP2R5CQ13362 524 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 MTMR1Q13613 665 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 ZSCAN23Q3MJ62 389 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms