RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 KRT39Q6A163 491 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 HAUS6Q7Z4H7 955 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 RAET1EQ8TD07 263 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 ADARB2Q9NS39 739 aaKnown RBP16.21■□□□□ 0.19
LIMS2-213ENST00000469300 MAP3K20Q9NYL2 800 aaKnown RBP16.21■□□□□ 0.19
LIMS2-213ENST00000469300 GH1P01241 217 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 KRT1P04264 644 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 ANTXR2P58335 489 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 KCNH2Q12809 1159 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 MXD4Q14582 209 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-213ENST00000469300 RDM1Q8NG50 284 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 TMEM39BQ9GZU3 492 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 ARID5BQ14865 1188 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 FAM213AQ9BRX8 229 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 SEPT10Q9P0V9 454 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 FBXO2Q9UK22 296 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-213ENST00000469300 DIS3Q9Y2L1 958 aaKnown RBP16.21■□□□□ 0.19
LIMS2-213ENST00000469300 PCDHA13Q9Y5I0 950 aa16.21■□□□□ 0.19
LIMS2-213ENST00000469300 MIF4GDA9UHW6 222 aaKnown RBP16.21■□□□□ 0.18
LIMS2-213ENST00000469300 GGPS1O95749 300 aa16.21■□□□□ 0.18
LIMS2-213ENST00000469300 TSPY1Q01534 308 aa16.21■□□□□ 0.18
LIMS2-213ENST00000469300 SGO2Q562F6 1265 aa16.21■□□□□ 0.18
LIMS2-213ENST00000469300 GPRC5AQ8NFJ5 357 aa16.21■□□□□ 0.18
LIMS2-213ENST00000469300 ZBED2Q9BTP6 218 aa16.21■□□□□ 0.18
LIMS2-213ENST00000469300 DPH5Q9H2P9 285 aa16.21■□□□□ 0.18
LIMS2-213ENST00000469300 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.18
LIMS2-213ENST00000469300 GUCY1A2P33402 732 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 SREBF2Q12772 1141 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 OR6J1Q8NGC5 347 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 STXBP3O00186 592 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 ASAP2O43150 1006 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 CALB1P05937 261 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 ATP1A3P13637 1013 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 IL1R1P14778 569 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 YWHABP31946 246 aaKnown RBP16.2■□□□□ 0.18
LIMS2-213ENST00000469300 SHC4Q6S5L8 630 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 EFCAB13Q8IY85 973 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 POLR1AO95602 1720 aaPredicted RBP16.2■□□□□ 0.18
LIMS2-213ENST00000469300 ARHGEF28Q8N1W1 1705 aaKnown RBP16.2■□□□□ 0.18
LIMS2-213ENST00000469300 RNF40O75150 1001 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 XPAP23025 273 aaPredicted RBP16.2■□□□□ 0.18
LIMS2-213ENST00000469300 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.2■□□□□ 0.18
LIMS2-213ENST00000469300 ADAMTS1Q9UHI8 967 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 CCL15-CCL14A0A0B4J2E2 113 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 KIF28PB7ZC32 967 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 CCL15Q16663 113 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 JMJD4Q9H9V9 463 aa16.2■□□□□ 0.18
LIMS2-213ENST00000469300 COL3A1P02461 1466 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-213ENST00000469300 CAP2P40123 477 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 HUNKP57058 714 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 ATP11AP98196 1134 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 PLCB4Q15147 1175 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 RBBP5Q15291 538 aaKnown RBP16.19■□□□□ 0.18
LIMS2-213ENST00000469300 SCARA5Q6ZMJ2 495 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 TRIM72Q6ZMU5 477 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 FRMD5Q7Z6J6 570 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 GPD1LQ8N335 351 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 ZNF560Q96MR9 790 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 GDAP1L1Q96MZ0 367 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 ADAM22Q9P0K1 906 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 CIB2O75838 187 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 ECEL1O95672 775 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 NFKBIAP25963 317 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 RFC5P40937 340 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 GCLMP48507 274 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 GUCY2FP51841 1108 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 ARHGAP24Q8N264 748 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 GOLPH3LQ9H4A5 285 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 SGK1O00141 431 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 HIP1RO75146 1068 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 STX2P32856 288 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 ARPP19P56211 112 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 DUOXA2Q1HG44 320 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 FAM83AQ86UY5 434 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 TRIM9Q9C026 710 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 RICTORQ6R327 1708 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 GOLGA8KD6RF30 607 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 ERO1BQ86YB8 467 aa16.19■□□□□ 0.18
LIMS2-213ENST00000469300 AGO2Q9UKV8 859 aaKnown RBP16.19■□□□□ 0.18
LIMS2-213ENST00000469300 RWDD2BP57060 319 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 CEP85LQ5SZL2 805 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 KCTD6Q8NC69 237 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 CALN1Q9BXU9 219 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 PFDN4Q9NQP4 134 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 SLC8A2Q9UPR5 921 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 A0A1W2PQC6 194 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 TROVE2P10155 538 aaKnown RBP eCLIP16.18■□□□□ 0.18
LIMS2-213ENST00000469300 CCDC62Q6P9F0 684 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 ADAT2Q7Z6V5 191 aaKnown RBP16.18■□□□□ 0.18
LIMS2-213ENST00000469300 CACNA2D3Q8IZS8 1091 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 DAGLBQ8NCG7 672 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms