RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CDC42EP1Q00587 391 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 FAAP100Q0VG06 881 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 MXD4Q14582 209 aaPredicted RBP16.86■□□□□ 0.29
SNIP1-202ENST00000468040 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 MAEAQ7L5Y9 396 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 ELOA2Q8IYF1 753 aaPredicted RBP16.86■□□□□ 0.29
SNIP1-202ENST00000468040 KIAA0319LQ8IZA0 1049 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 DNAJB3Q8WWF6 145 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 C7orf25Q9BPX7 421 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 REEP2Q9BRK0 252 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 TRIM9Q9C026 710 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 POLR3FQ9H1D9 316 aaPredicted RBP16.86■□□□□ 0.29
SNIP1-202ENST00000468040 C17orf75Q9HAS0 396 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 AKT3Q9Y243 479 aa16.86■□□□□ 0.29
SNIP1-202ENST00000468040 M0QZ92 97 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 ARL2P36404 184 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 THPOP40225 353 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 RBL2Q08999 1139 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 MKRN4PQ13434 485 aaPredicted RBP16.85■□□□□ 0.29
SNIP1-202ENST00000468040 DRP2Q13474 957 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 GIT2Q14161 759 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 PPP2R5AQ15172 486 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 SH3RF1Q7Z6J0 888 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 DHX38Q92620 1227 aaKnown RBP16.85■□□□□ 0.29
SNIP1-202ENST00000468040 STAMQ92783 540 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 TMEM39AQ9NV64 488 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 KCNG1Q9UIX4 513 aa16.85■□□□□ 0.29
SNIP1-202ENST00000468040 TRIP12Q14669 1992 aaPredicted RBP16.85■□□□□ 0.29
SNIP1-202ENST00000468040 NPHP3-ACAD11A0A0J9YXS1 232 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
SNIP1-202ENST00000468040 FAM13AO94988 1023 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 TFDP1Q14186 410 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 POSTNQ15063 836 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 TRIM71Q2Q1W2 868 aaKnown RBP16.84■□□□□ 0.29
SNIP1-202ENST00000468040 RHPN2Q8IUC4 686 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 GPT2Q8TD30 523 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 PRPF31Q8WWY3 499 aaKnown RBP16.84■□□□□ 0.29
SNIP1-202ENST00000468040 WNT8BQ93098 351 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 IFT74Q96LB3 600 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 HIPK3Q9H422 1215 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 PARVGQ9HBI0 331 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 LARSQ9P2J5 1176 aaKnown RBP16.84■□□□□ 0.29
SNIP1-202ENST00000468040 TBX21Q9UL17 535 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 COL4A3BPQ9Y5P4 624 aa16.84■□□□□ 0.29
SNIP1-202ENST00000468040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.83■□□□□ 0.28
SNIP1-202ENST00000468040 VTNP04004 478 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 CKBP12277 381 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 PLS3P13797 630 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 GAP43P17677 238 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 ZNF131P52739 623 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 ASIC1P78348 528 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 MRPS6P82932 125 aaKnown RBP16.83■□□□□ 0.28
SNIP1-202ENST00000468040 LAMTOR4Q0VGL1 99 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 MAPK7Q13164 816 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 DMP1Q13316 513 aaPredicted RBP16.83■□□□□ 0.28
SNIP1-202ENST00000468040 ZNF410Q86VK4 478 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 CCDC65Q8IXS2 484 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 GRAMD1CQ8IYS0 662 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 DAW1Q8N136 415 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 ASAP3Q8TDY4 903 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 EVPLQ92817 2033 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 DNAJC19Q96DA6 116 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
SNIP1-202ENST00000468040 ZHX3Q9H4I2 956 aa16.83■□□□□ 0.28
SNIP1-202ENST00000468040 PVALEFA0A1B0GWK0 134 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 FRMD3A2A2Y4 597 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 RSPH10B2B2RC85 870 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 KIAA0355O15063 1070 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 EVI5O60447 810 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 RSPH10BP0C881 870 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 IDEP14735 1019 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 GLRA2P23416 452 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 NAMPTP43490 491 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 GPC3P51654 580 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 NLRP11P59045 1033 aaKnown RBP16.82■□□□□ 0.28
SNIP1-202ENST00000468040 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
SNIP1-202ENST00000468040 POU5F1BQ06416 359 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 TMEM62Q0P6H9 643 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 CUL4BQ13620 913 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 FAM26DQ5JW98 314 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 NLRP7Q8WX94 980 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 NLRP4Q96MN2 994 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 CELF4Q9BZC1 486 aaKnown RBP16.82■□□□□ 0.28
SNIP1-202ENST00000468040 BLZF1Q9H2G9 400 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 PRDM5Q9NQX1 630 aaPredicted RBP16.82■□□□□ 0.28
SNIP1-202ENST00000468040 SEL1LQ9UBV2 794 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 PRKAG2Q9UGJ0 569 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 TRPV2Q9Y5S1 764 aa16.82■□□□□ 0.28
SNIP1-202ENST00000468040 GPR32O75388 356 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 PARNO95453 639 aaKnown RBP16.81■□□□□ 0.28
SNIP1-202ENST00000468040 CTSHP09668 335 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 SRGAP2CP0DJJ0 459 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 SELPP16109 830 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 CRYBB1P53674 252 aaPredicted RBP16.81■□□□□ 0.28
SNIP1-202ENST00000468040 MDM2Q00987 491 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms