RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 NBR1Q14596 966 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 ZNF410Q86VK4 478 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 NPAS4Q8IUM7 802 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 EXOC8Q8IYI6 725 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 ARNTL2Q8WYA1 636 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 YME1L1Q96TA2 773 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 CERS4Q9HA82 394 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.96■□□□□ 0.31
ATG4B-215ENST00000468018 PCDHB6Q9Y5E3 794 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 ADGRA3Q8IWK6 1321 aa16.96■□□□□ 0.3
ATG4B-215ENST00000468018 GAS2O43903 313 aaKnown RBP16.95■□□□□ 0.3
ATG4B-215ENST00000468018 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
ATG4B-215ENST00000468018 SARSP49591 514 aaKnown RBP16.95■□□□□ 0.3
ATG4B-215ENST00000468018 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
ATG4B-215ENST00000468018 FAM189BP81408 668 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 GRB10Q13322 594 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 GNL2Q13823 731 aaKnown RBP16.95■□□□□ 0.3
ATG4B-215ENST00000468018 OTUD6AQ7L8S5 288 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 TPH2Q8IWU9 490 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 SAMD11Q96NU1 681 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 POLR3CQ9BUI4 534 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-215ENST00000468018 IFT122Q9HBG6 1241 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 TUFT1Q9NNX1 390 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 XPNPEP1Q9NQW7 623 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 C1orf112Q9NSG2 853 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 ANKEF1Q9NU02 776 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 SMC3Q9UQE7 1217 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 MTCH2Q9Y6C9 303 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 BRWD1Q9NSI6 2320 aa16.95■□□□□ 0.3
ATG4B-215ENST00000468018 MYO7AQ13402 2215 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 SPTBN5Q9NRC6 3674 aaKnown RBP16.94■□□□□ 0.3
ATG4B-215ENST00000468018 MED24O75448 989 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 RPA1P27694 616 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 TECP42680 631 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 RARRES1P49788 294 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 DNM2P50570 870 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 EMC2Q15006 297 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 IGSF22Q8N9C0 903 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 SLC7A3Q8WY07 619 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 CLP1Q92989 425 aaKnown RBP16.94■□□□□ 0.3
ATG4B-215ENST00000468018 ADAM2Q99965 735 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 LMCD1Q9NZU5 365 aa16.94■□□□□ 0.3
ATG4B-215ENST00000468018 SUCLA2Q9P2R7 463 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-215ENST00000468018 PLXNA4Q9HCM2 1894 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 A0A087WZ62 844 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 C5orf67F2Z3F1 127 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 LAD1O00515 517 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 MUTP22033 750 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 PRPHP41219 470 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 POLGP54098 1239 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-215ENST00000468018 PTGDRQ13258 359 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 RILPL1Q5EBL4 403 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 XKR9Q5GH70 373 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 SLC24A5Q71RS6 500 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 RHPN2Q8IUC4 686 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 CMTR2Q8IYT2 770 aaKnown RBP16.93■□□□□ 0.3
ATG4B-215ENST00000468018 ZNF668Q96K58 619 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-215ENST00000468018 FDXACB1Q9BRP7 624 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-215ENST00000468018 ELAC1Q9H777 363 aaKnown RBP16.93■□□□□ 0.3
ATG4B-215ENST00000468018 COL4A3BPQ9Y5P4 624 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 MYH15Q9Y2K3 1946 aa16.93■□□□□ 0.3
ATG4B-215ENST00000468018 DGAT1O75907 488 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 STAG3L1P0CL83 205 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 PDIA5Q14554 519 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 IL17AQ16552 155 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 EPC2Q52LR7 807 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 LARP1BQ659C4 914 aaKnown RBP16.92■□□□□ 0.3
ATG4B-215ENST00000468018 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 KSR1Q8IVT5 923 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 GDPD5Q8WTR4 605 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 NLRP7Q8WX94 980 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
ATG4B-215ENST00000468018 MTRQ99707 1265 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
ATG4B-215ENST00000468018 GCOM2Q9BZD3 368 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-215ENST00000468018 DBR1Q9UK59 544 aaKnown RBP16.92■□□□□ 0.3
ATG4B-215ENST00000468018 DENND3A2RUS2 1198 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 H3BNC9 293 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 H3BQV1 296 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 IGFBP4P22692 258 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 ATP2C1P98194 919 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-215ENST00000468018 IFNLR1Q8IU57 520 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-215ENST00000468018 TMEM192Q8IY95 271 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 FIBCD1Q8N539 461 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 PIGOQ8TEQ8 1089 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 PSPC1Q8WXF1 523 aaKnown RBP16.91■□□□□ 0.3
ATG4B-215ENST00000468018 TMEM143Q96AN5 459 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 TMEM161AQ9NX61 479 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 MTUS1Q9ULD2 1270 aa16.91■□□□□ 0.3
ATG4B-215ENST00000468018 MYH11P35749 1972 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 A0A0U1RQF3 1178 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 ASAP2O43150 1006 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 CSDE1O75534 798 aaKnown RBP16.9■□□□□ 0.3
ATG4B-215ENST00000468018 FGFR4P22455 802 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 ARL2P36404 184 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 POU5F1BQ06416 359 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 LAMTOR4Q0VGL1 99 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms