RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 MAN1B1Q9UKM7 699 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 OGDHLQ9ULD0 1010 aa6.62□□□□□ -1.35
USP39-213ENST00000467885 FRMD3A2A2Y4 597 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ARHGEF35A5YM69 484 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 RSPH10B2B2RC85 870 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 MSCO60682 206 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 RHOBTB3O94955 611 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 SGPL1O95470 568 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 RPN1P04843 607 aaKnown RBP6.61□□□□□ -1.35
USP39-213ENST00000467885 SSBP05455 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP39-213ENST00000467885 ASGR1P07306 291 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 GJB1P08034 283 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 RSPH10BP0C881 870 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 MARK3P27448 753 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 HOXC8P31273 242 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 CDK7P50613 346 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ZNF131P52739 623 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ACLYP53396 1101 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 SOX10P56693 466 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ZNF445P59923 1031 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ZNF200P98182 395 aaPredicted RBP6.61□□□□□ -1.35
USP39-213ENST00000467885 PRKCEQ02156 737 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 STK4Q13043 487 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 PSMD2Q13200 908 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 KIAA0753Q2KHM9 967 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 NBPF20Q3BBV1 942 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 MTERF2Q49AM1 385 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 KMT5BQ4FZB7 885 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 SLC9C1Q4G0N8 1177 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 CXCL17Q6UXB2 119 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 UNC13DQ70J99 1090 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ZNF720Q7Z2F6 126 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 GAS2L3Q86XJ1 694 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 KIAA0319LQ8IZA0 1049 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 LINC01465Q8N7H1 131 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 SLC43A3Q8NBI5 491 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ARRDC4Q8NCT1 418 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 RASSF8Q8NHQ8 419 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 PPP1R13LQ8WUF5 828 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 TRAPPC12Q8WVT3 735 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 HPS3Q969F9 1004 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ZBTB10Q96DT7 871 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ZNF333Q96JL9 665 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 DEFB118Q96PH6 123 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 REEP2Q9BRK0 252 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 MTG1Q9BT17 334 aaPredicted RBP6.61□□□□□ -1.35
USP39-213ENST00000467885 STRA6Q9BX79 667 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP39-213ENST00000467885 RNF208Q9H0X6 261 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 SPC25Q9HBM1 224 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 PANK4Q9NVE7 773 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 KCND2Q9NZV8 630 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 TCEAL9Q9UHQ7 104 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 HOOK1Q9UJC3 728 aaKnown RBP6.61□□□□□ -1.35
USP39-213ENST00000467885 PPME1Q9Y570 386 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 ZNF236Q9UL36 1845 aa6.61□□□□□ -1.35
USP39-213ENST00000467885 NRCAMQ92823 1304 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 SYCE3A1L190 88 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 MBLAC1A4D2B0 266 aaPredicted RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 RRN3P2A6NIE6 340 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 BIN1O00499 593 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 MAGEB2O15479 319 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 ZEB2O60315 1214 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 HIP1RO75146 1068 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 DGAT1O75907 488 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 SMC2O95347 1197 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 MYCP01106 439 aaPredicted RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 ZNF286BP0CG31 522 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 SMIM10L2AP0DMW4 78 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 SMIM10L2BP0DMW5 78 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 HOXD13P35453 343 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 RFC5P40937 340 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 PRCPP42785 496 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 NLRP12P59046 1061 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 KCNC4Q03721 635 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 RAD51AP2Q09MP3 1159 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 DRP2Q13474 957 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 BRDTQ58F21 947 aaPredicted RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 HERC4Q5GLZ8 1057 aaPredicted RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 ZNF658Q5TYW1 1059 aaPredicted RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 IER5Q5VY09 327 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 EFCAB12Q6NXP0 572 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 MTHFD1LQ6UB35 978 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 MAEAQ7L5Y9 396 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 RNF180Q86T96 592 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 PCSK9Q8NBP7 692 aaKnown RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 GLIS3Q8NEA6 775 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 ZNF507Q8TCN5 953 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 PRPF31Q8WWY3 499 aaKnown RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 BSNDQ8WZ55 320 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 SMARCE1Q969G3 411 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 SYAP1Q96A49 352 aaPredicted RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 TMEM143Q96AN5 459 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 FAM167AQ96KS9 214 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 CTAGE1Q96RT6 745 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 FGFBP2Q9BYJ0 223 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 GPRC5CQ9NQ84 441 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 HDAC6Q9UBN7 1215 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 SEPT9Q9UHD8 586 aaPredicted RBP6.6□□□□□ -1.35
USP39-213ENST00000467885 ODF2LQ9ULJ1 636 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms