RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 SUGCTQ9HAC7 445 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 NOD1Q9Y239 953 aa16.35■□□□□ 0.21
DDX56-208ENST00000467318 MYMKA6NI61 221 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 CCDC85CA6NKD9 419 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 PTMAP06454 111 aaKnown RBP16.34■□□□□ 0.21
DDX56-208ENST00000467318 TPM2P07951 284 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 ATN1P54259 1190 aaPredicted RBP16.34■□□□□ 0.21
DDX56-208ENST00000467318 IER5Q5VY09 327 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 ZNF710Q8N1W2 664 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 STAMQ92783 540 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 KIFAP3Q92845 792 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 DRC1Q96MC2 740 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 XPNPEP1Q9NQW7 623 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 ARID2Q68CP9 1835 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 TLR3O15455 904 aaKnown RBP16.34■□□□□ 0.21
DDX56-208ENST00000467318 GTPBP6O43824 516 aaPredicted RBP16.34■□□□□ 0.21
DDX56-208ENST00000467318 CCDC192P0DO97 292 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 CYP2C9P11712 490 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 ZNF200P98182 395 aaPredicted RBP16.34■□□□□ 0.21
DDX56-208ENST00000467318 CDC42EP1Q00587 391 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 MDM2Q00987 491 aaPredicted RBP16.34■□□□□ 0.21
DDX56-208ENST00000467318 PTK7Q13308 1070 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 GIT2Q14161 759 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 POSTNQ15063 836 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 DYMQ7RTS9 669 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 SERINC5Q86VE9 423 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 FAM126BQ8IXS8 530 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 NME8Q8N427 588 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 LINC01465Q8N7H1 131 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 MAP7D2Q96T17 732 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 KCNG1Q9UIX4 513 aa16.34■□□□□ 0.21
DDX56-208ENST00000467318 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 ASAP2O43150 1006 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 B4GALT4O60513 344 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 TPM3P06753 285 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 RTP1P59025 263 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 MXD4Q14582 209 aaPredicted RBP16.33■□□□□ 0.2
DDX56-208ENST00000467318 FAM102BQ5T8I3 360 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 MAEAQ7L5Y9 396 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 RSPH3Q86UC2 560 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 LRRC71Q8N4P6 559 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.2
DDX56-208ENST00000467318 DNAJC19Q96DA6 116 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 ZBTB10Q96DT7 871 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 REEP2Q9BRK0 252 aa16.33■□□□□ 0.2
DDX56-208ENST00000467318 TRMT13Q9NUP7 481 aaKnown RBP16.33■□□□□ 0.2
DDX56-208ENST00000467318 PVALEFA0A1B0GWK0 134 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 HIP1RO75146 1068 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 CD4P01730 458 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 ARL2P36404 184 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 CLCN3P51790 818 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 RAD51AP2Q09MP3 1159 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
DDX56-208ENST00000467318 CUL4BQ13620 913 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 GRAMD1CQ8IYS0 662 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 KIAA0319LQ8IZA0 1049 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 CTAGE1Q96RT6 745 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 PARVGQ9HBI0 331 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 LARSQ9P2J5 1176 aaKnown RBP16.32■□□□□ 0.2
DDX56-208ENST00000467318 SUCLA2Q9P2R7 463 aaPredicted RBP16.32■□□□□ 0.2
DDX56-208ENST00000467318 COL4A3BPQ9Y5P4 624 aa16.32■□□□□ 0.2
DDX56-208ENST00000467318 TRIP12Q14669 1992 aaPredicted RBP16.31■□□□□ 0.2
DDX56-208ENST00000467318 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.31■□□□□ 0.2
DDX56-208ENST00000467318 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
DDX56-208ENST00000467318 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
DDX56-208ENST00000467318 KCNA4P22459 653 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 ZNF131P52739 623 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 ASIC1P78348 528 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 DPYDQ12882 1025 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 PPP2R5AQ15172 486 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 CCDC65Q8IXS2 484 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 FUCA2Q9BTY2 467 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 BLZF1Q9H2G9 400 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 AKT3Q9Y243 479 aa16.31■□□□□ 0.2
DDX56-208ENST00000467318 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 CAND2O75155 1236 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 FAM13AO94988 1023 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 SMC2O95347 1197 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 IDEP14735 1019 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 TLE2Q04725 743 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 MAPK7Q13164 816 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 DRP2Q13474 957 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 LRRC26Q2I0M4 334 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 TRIM60Q495X7 471 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 UNC13DQ70J99 1090 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 DAW1Q8N136 415 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 DNAJB3Q8WWF6 145 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 PRPF31Q8WWY3 499 aaKnown RBP16.3■□□□□ 0.2
DDX56-208ENST00000467318 EVPLQ92817 2033 aa16.3■□□□□ 0.2
DDX56-208ENST00000467318 CCDC47Q96A33 483 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms