RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CALR3Q96L12 384 aaKnown RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 ATP6V1G3Q96LB4 118 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 SPAG5Q96R06 1193 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 REEP2Q9BRK0 252 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 ZNF341Q9BYN7 854 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 ZHX3Q9H4I2 956 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 CNOT7Q9UIV1 285 aaKnown RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 ATXN2Q99700 1313 aaKnown RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 DOCK1Q14185 1865 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 AKAP3O75969 853 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 NR1D1P20393 614 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 LSP1P33241 339 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 JAM2P57087 298 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 CUL1Q13616 776 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 BMT2Q1RMZ1 405 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 ALKBH5Q6P6C2 394 aaKnown RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 SLFN11Q7Z7L1 901 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 SFR1Q86XK3 245 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 TPCN2Q8NHX9 752 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 LENG9Q96B70 501 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 GOLPH3Q9H4A6 298 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 SIX2Q9NPC8 291 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 NDUFAB1O14561 156 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 XRCC5P13010 732 aaKnown RBP16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 PRELPP51888 382 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 TBC1D10BQ4KMP7 808 aaPredicted RBP16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 LRIG3Q6UXM1 1119 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 LPAR1Q92633 364 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 EHMT1Q9H9B1 1298 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 FBXO28Q9NVF7 368 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 DNM3Q9UQ16 869 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 SAMM50Q9Y512 469 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 STK24Q9Y6E0 443 aa16.05■□□□□ 0.16
PRPF38B-204ENST00000467302 H0YGN5 161 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 WDR46O15213 610 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 CALUO43852 315 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 FLOT1O75955 427 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 B4GALNT4Q76KP1 1039 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 ERMNQ8TAM6 284 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 EPN3Q9H201 632 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 AJAP1Q9UKB5 411 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 PLAAQ9Y263 795 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 STXBP5LQ9Y2K9 1186 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 NFS1Q9Y697 457 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 ASTN1O14525 1302 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 A0A0A6YYK5 440 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 MEIS1O00470 390 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 SLC16A3O15427 465 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 MSH4O15457 936 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 CEP104O60308 925 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 GUCY1A3Q02108 690 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 DCAF15Q66K64 600 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 MICALL1Q8N3F8 863 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 RASGEF1CQ8N431 466 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 SLC35C1Q96A29 364 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.04■□□□□ 0.167e-8■■■□□ 19.2
PRPF38B-204ENST00000467302 KIAA1683Q9H0B3 1180 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 TMBIM4Q9HC24 238 aa16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 METTL14Q9HCE5 456 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-204ENST00000467302 DICER1Q9UPY3 1922 aaKnown RBP16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 SMCHD1A6NHR9 2005 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 PGRMC1O00264 195 aaKnown RBP16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 PPP1R37O75864 691 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 ERLIN2O94905 339 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 NR3C1P04150 777 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 HSD17B3P37058 310 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 LIG3P49916 1009 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 UAP1Q16222 522 aaPredicted RBP16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 LDHDQ86WU2 507 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 HOOK2Q96ED9 719 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 DEFB129Q9H1M3 183 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 INTUQ9ULD6 942 aa16.03■□□□□ 0.16
PRPF38B-204ENST00000467302 GTPBP10A4D1E9 387 aaKnown RBP16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 SRRM3A6NNA2 597 aaPredicted RBP16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 DDX3XO00571 662 aaKnown RBP eCLIP16.02■□□□□ 0.165e-9■□□□□ 8.9
PRPF38B-204ENST00000467302 INPP5BP32019 993 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 MDH1P40925 334 aaKnown RBP16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 NPEPPSP55786 919 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 PTGISQ16647 500 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 CEP85LQ5SZL2 805 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 SPATS2Q86XZ4 545 aaKnown RBP16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 APOBEC3FQ8IUX4 373 aaKnown RBP16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 NLGN2Q8NFZ4 835 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 OLIG1Q8TAK6 271 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 CYP2W1Q8TAV3 490 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms