RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 GBP4Q96PP9 640 aa6.07□□□□□ -1.44
SMC4-207ENST00000467263 MTFR1LQ9H019 292 aa6.07□□□□□ -1.44
SMC4-207ENST00000467263 AGO3Q9H9G7 860 aaKnown RBP6.07□□□□□ -1.44
SMC4-207ENST00000467263 TLR9Q9NR96 1032 aa6.07□□□□□ -1.44
SMC4-207ENST00000467263 B4GALT6Q9UBX8 382 aa6.07□□□□□ -1.44
SMC4-207ENST00000467263 PRAMEF22A3QJZ6 481 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 ACRV1P26436 265 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 EIF4HQ15056 248 aaKnown RBP6.06□□□□□ -1.44
SMC4-207ENST00000467263 STILQ15468 1287 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 OR14K1Q8NGZ2 314 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 SCYL1Q96KG9 808 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 CEP89Q96ST8 783 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 PCIF1Q9H4Z3 704 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 PLA2G3Q9NZ20 509 aa6.06□□□□□ -1.44
SMC4-207ENST00000467263 ZNF891A8MT65 544 aaPredicted RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 H7C1D1 291 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 MYCLP1P12525 358 aaPredicted RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 SLC9A1P19634 815 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 POU3F2P20265 443 aaPredicted RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 HSD3B2P26439 372 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 SDHAP31040 664 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 MRE11P49959 708 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 DPTQ07507 201 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 KANK2Q63ZY3 851 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 SPTY2D1Q68D10 685 aaPredicted RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 TRIM68Q6AZZ1 485 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 CC2D1AQ6P1N0 951 aaPredicted RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 USP30Q70CQ3 517 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 KIAA1958Q8N8K9 716 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 LARP4BQ92615 738 aaKnown RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 MMRN2Q9H8L6 949 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 H2AFY2Q9P0M6 372 aaPredicted RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 PUF60Q9UHX1 559 aaKnown RBP6.05□□□□□ -1.44
SMC4-207ENST00000467263 ZKSCAN5Q9Y2L8 839 aa6.05□□□□□ -1.44
SMC4-207ENST00000467263 A0A087X0B3 334 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 PDE8AO60658 829 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 GAS7O60861 476 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 ATP2A2P16615 1042 aaKnown RBP6.04□□□□□ -1.44
SMC4-207ENST00000467263 PTX3P26022 381 aaPredicted RBP6.04□□□□□ -1.44
SMC4-207ENST00000467263 HIBADHP31937 336 aaKnown RBP6.04□□□□□ -1.44
SMC4-207ENST00000467263 MCM7P33993 719 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 STAT5BP51692 787 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 HGFACQ04756 655 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 ACAP1Q15027 740 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 ZNF174Q15697 407 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 SEPT7Q16181 437 aaKnown RBP6.04□□□□□ -1.44
SMC4-207ENST00000467263 SMN1Q16637 294 aaKnown RBP6.04□□□□□ -1.44
SMC4-207ENST00000467263 ZNF627Q7L945 461 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 LDLRAD3Q86YD5 345 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 PPM1KQ8N3J5 372 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 AMER2Q8N7J2 671 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 FAM89AQ96GI7 184 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 TMEM176AQ96HP8 235 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 SLKQ9H2G2 1235 aaPredicted RBP6.04□□□□□ -1.44
SMC4-207ENST00000467263 OXSMQ9NWU1 459 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 CEP72Q9P209 647 aa6.04□□□□□ -1.44
SMC4-207ENST00000467263 WDR33Q9C0J8 1336 aaKnown RBP6.03□□□□□ -1.44
SMC4-207ENST00000467263 GOLGA6L22H0YM25 854 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 F2P00734 622 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 STAT3P40763 770 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 CREB3L3Q68CJ9 461 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 OTOP2Q7RTS6 562 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 AHI1Q8N157 1196 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 CHTF18Q8WVB6 975 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 LEO1Q8WVC0 666 aaPredicted RBP6.03□□□□□ -1.44
SMC4-207ENST00000467263 ELF4Q99607 663 aaPredicted RBP6.03□□□□□ -1.44
SMC4-207ENST00000467263 ORAI3Q9BRQ5 295 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 ACSS2Q9NR19 701 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 IFT57Q9NWB7 429 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 THG1LQ9NWX6 298 aaKnown RBP6.03□□□□□ -1.44
SMC4-207ENST00000467263 ASB1Q9Y576 335 aa6.03□□□□□ -1.44
SMC4-207ENST00000467263 GSG1L2A8MUP6 293 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 RPS19P39019 145 aaKnown RBP6.02□□□□□ -1.45
SMC4-207ENST00000467263 ECE1P42892 770 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 INHBEP58166 350 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 DSG1Q02413 1049 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 TUBA3CQ13748 450 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 SAFB2Q14151 953 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMC4-207ENST00000467263 GRM7Q14831 915 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 TAF7LQ5H9L4 462 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 TUBA3EQ6PEY2 450 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 CXXC5Q7LFL8 322 aaKnown RBP6.02□□□□□ -1.45
SMC4-207ENST00000467263 RTN4RL1Q86UN2 441 aaPredicted RBP6.02□□□□□ -1.45
SMC4-207ENST00000467263 KIF18BQ86Y91 864 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 WDR48Q8TAF3 677 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 FOXRED1Q96CU9 486 aaPredicted RBP6.02□□□□□ -1.45
SMC4-207ENST00000467263 GPR101Q96P66 508 aaPredicted RBP6.02□□□□□ -1.45
SMC4-207ENST00000467263 BTBD2Q9BX70 525 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 OR10A2Q9H208 303 aa6.02□□□□□ -1.45
SMC4-207ENST00000467263 A0A0G2JNJ9 132 aa6.01□□□□□ -1.45
SMC4-207ENST00000467263 FNTBP49356 437 aa6.01□□□□□ -1.45
SMC4-207ENST00000467263 SCNN1BP51168 640 aa6.01□□□□□ -1.45
SMC4-207ENST00000467263 MOGSQ13724 837 aa6.01□□□□□ -1.45
SMC4-207ENST00000467263 SART3Q15020 963 aaKnown RBP6.01□□□□□ -1.45
SMC4-207ENST00000467263 TMEM200BQ69YZ2 307 aa6.01□□□□□ -1.45
SMC4-207ENST00000467263 PCSK4Q6UW60 755 aa6.01□□□□□ -1.45
SMC4-207ENST00000467263 Q6ZPA2 131 aa6.01□□□□□ -1.45
SMC4-207ENST00000467263 BCL6BQ8N143 479 aaPredicted RBP6.01□□□□□ -1.45
SMC4-207ENST00000467263 UBR7Q8N806 425 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms