RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 APOL3O95236 402 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 FKBP9O95302 570 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 CR2P20023 1033 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 BCAR1P56945 870 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 ADCY2Q08462 1091 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 ADAM15Q13444 863 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 GPR158Q5T848 1215 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 TIGD7Q6NT04 549 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-203ENST00000466732 KLHDC10Q6PID8 442 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 FKBP9P1Q75LS8 142 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 RNF180Q86T96 592 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 GIMAP8Q8ND71 665 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-203ENST00000466732 OR14K1Q8NGZ2 314 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 C12orf65Q9H3J6 166 aaKnown RBP5.59□□□□□ -1.51
VPS13D-203ENST00000466732 SEMA4AQ9H3S1 761 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 PUF60Q9UHX1 559 aaKnown RBP5.59□□□□□ -1.51
VPS13D-203ENST00000466732 DENND2AQ9ULE3 1009 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 ZFR2Q9UPR6 939 aaKnown RBP5.59□□□□□ -1.51
VPS13D-203ENST00000466732 CTDP1Q9Y5B0 961 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-203ENST00000466732 CDC14BO60729 498 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 ZNF623O75123 536 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 PHC1P78364 1004 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 HGFACQ04756 655 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 KIAA1841Q6NSI8 718 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 UNQ6494/PRO21346Q6UXR6 183 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 BMP8AQ7Z5Y6 402 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 Q8TCH9 128 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 NKD2Q969F2 451 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-203ENST00000466732 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 C1QTNF3Q9BXJ4 246 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 HAPLN2Q9GZV7 340 aa5.58□□□□□ -1.52
VPS13D-203ENST00000466732 LCHNA4D1U4 455 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 ELL2O00472 640 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 H2AFYO75367 372 aaKnown RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 ZNF20P17024 532 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 LSP1P33241 339 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 SESN2P58004 480 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 DUSP8Q13202 625 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 DHCR24Q15392 516 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 TERF2Q15554 542 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 ZNF585AQ6P3V2 769 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 C11orf74Q86VG3 221 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 FUKQ8N0W3 1084 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 ZNF610Q8N9Z0 462 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 DVL3Q92997 716 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 GFM2Q969S9 779 aaKnown RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 DYDC2Q96IM9 177 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 ZNF496Q96IT1 587 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 PITHD1Q9GZP4 211 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 MS4A5Q9H3V2 200 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 DEF6Q9H4E7 631 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 MTG2Q9H4K7 406 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 EMC7Q9NPA0 242 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 POLR3BQ9NW08 1133 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 USP36Q9P275 1121 aaKnown RBP5.57□□□□□ -1.52
VPS13D-203ENST00000466732 MSRAQ9UJ68 235 aa5.57□□□□□ -1.52
VPS13D-203ENST00000466732 A0A0A6YYJ9 748 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 OPHN1O60890 802 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 RAD17O75943 681 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 BPIP17213 487 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 MASP1P48740 699 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
VPS13D-203ENST00000466732 UBR7Q8N806 425 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 USP7Q93009 1102 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 LPPQ93052 612 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 WDR92Q96MX6 357 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 GPR20Q99678 358 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 PLA2G12BQ9BX93 195 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 KLC2Q9H0B6 622 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 DNAI1Q9UI46 699 aa5.56□□□□□ -1.52
VPS13D-203ENST00000466732 C2orf78A6NCI8 922 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 MAFGO15525 162 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 SLC26A4O43511 780 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 CLSTN1O94985 981 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 STAT3P40763 770 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 SELENOPP49908 381 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 ATP2C1P98194 919 aaPredicted RBP5.55□□□□□ -1.52
VPS13D-203ENST00000466732 ACAP1Q15027 740 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 DDB1Q16531 1140 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 ATP13A4Q4VNC1 1196 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 ZBTB41Q5SVQ8 909 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 BROXQ5VW32 411 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 STRA8Q7Z7C7 330 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 GPR135Q8IZ08 494 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 SLC5A5Q92911 643 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 SLC7A6OSQ96CW6 309 aaPredicted RBP5.55□□□□□ -1.52
VPS13D-203ENST00000466732 OR14A2Q96R54 314 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 NOL10Q9BSC4 688 aaKnown RBP5.55□□□□□ -1.52
VPS13D-203ENST00000466732 CAAP1Q9H8G2 361 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 MSL2Q9HCI7 577 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 SYNPO2Q9UMS6 1093 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 JAG2Q9Y219 1238 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 TCAF1Q9Y4C2 921 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 SLC30A1Q9Y6M5 507 aa5.55□□□□□ -1.52
VPS13D-203ENST00000466732 MYPNQ86TC9 1320 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 A0A0A6YYK5 440 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-203ENST00000466732 PMS2P1A4D2B8 440 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 NEMP1O14524 444 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms