RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TCHHQ07283 1943 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 ASAP2O43150 1006 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 CXCL10P02778 98 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 PFKMP08237 780 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 GPC3P51654 580 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 CRYBB1P53674 252 aaPredicted RBP16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 SLC12A3P55017 1021 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 CDC42EP1Q00587 391 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 FBXO47Q5MNV8 452 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 RESP18Q5W5W9 173 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 RINT1Q6NUQ1 792 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 C16orf59Q7L2K0 433 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 RHPN2Q8IUC4 686 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 PRPF31Q8WWY3 499 aaKnown RBP16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 RAD54LQ92698 747 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 VWCEQ96DN2 955 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 ZNF668Q96K58 619 aaPredicted RBP16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 OSBPL7Q9BZF2 842 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 ADAMTS10Q9H324 1103 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 FAM13BQ9NYF5 915 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
DNMT3A-208ENST00000466601 TANC1Q9C0D5 1861 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 A0A087X0B3 334 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 FGBP02675 491 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 GHRP10912 638 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 BMP8BP34820 402 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 ARL2P36404 184 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 STAT6P42226 847 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 LAMTOR4Q0VGL1 99 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 DHX8Q14562 1220 aaKnown RBP16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 MCM6Q14566 821 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 LPIN1Q14693 890 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 CHRDL2Q6WN34 429 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 C1orf186Q6ZWK4 172 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 ZNF365Q70YC5 407 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 KSR1Q8IVT5 923 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 PDILTQ8N807 584 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 NLRP7Q8WX94 980 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 LARP4BQ92615 738 aaKnown RBP16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 SCLT1Q96NL6 688 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 OSMRQ99650 979 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 RUSC1Q9BVN2 902 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 POLR3FQ9H1D9 316 aaPredicted RBP16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 GPRC5CQ9NQ84 441 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 COL4A3BPQ9Y5P4 624 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 SQORQ9Y6N5 450 aa16.05■□□□□ 0.16
DNMT3A-208ENST00000466601 SCN5AQ14524 2016 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 A0A087WZ62 844 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 RBAK-RBAKDNI3L0D1 243 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 CMA1P23946 247 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 MXD4Q14582 209 aaPredicted RBP16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 NAALADL2Q58DX5 795 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 TMEM240Q5SV17 173 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 PSRC1Q6PGN9 363 aaPredicted RBP16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 TSHZ1Q6ZSZ6 1077 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 ZNF410Q86VK4 478 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 USP38Q8NB14 1042 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 TMEM40Q8WWA1 233 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 NLRP4Q96MN2 994 aa16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.04■□□□□ 0.161e-10■□□□□ 10.9
DNMT3A-208ENST00000466601 FDXACB1Q9BRP7 624 aaPredicted RBP16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 GCOM2Q9BZD3 368 aaPredicted RBP16.04■□□□□ 0.16
DNMT3A-208ENST00000466601 SRGAP2CP0DJJ0 459 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 GLRA2P23416 452 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 GUCY2CP25092 1073 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 TPRNQ4KMQ1 711 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 CNKSR3Q6P9H4 555 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 GPBP1Q86WP2 473 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 DBF4BQ8NFT6 615 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 SEPT8Q92599 483 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 DHX58Q96C10 678 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 TIPINQ9BVW5 301 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 IFIH1Q9BYX4 1025 aaKnown RBP16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 PRO3102Q9H379 93 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 AGO3Q9H9G7 860 aaKnown RBP16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 POLD4Q9HCU8 107 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 KCND2Q9NZV8 630 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 NOC2LQ9Y3T9 749 aaKnown RBP16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 LOXHD1Q8IVV2 1947 aa16.03■□□□□ 0.16
DNMT3A-208ENST00000466601 A0A1B0GVL5 298 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 A0A1W2PQ27 194 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 A0A1W2PQ64 194 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 A0A1W2PQD8 194 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 POLR2DO15514 142 aaKnown RBP16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 HIP1RO75146 1068 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 RPS6KA5O75582 802 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 ACTN1P12814 892 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 EIF4BP23588 611 aaKnown RBP16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 CD52P31358 61 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 CAPSQ13938 189 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 TFDP1Q14186 410 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 SHHQ15465 462 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 E2F4Q16254 413 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 CSPP1Q1MSJ5 1256 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms