RNA–Protein interactions for RNA: ENST00000466359.1

NFX1-205, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 3

Gene NFX1, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-205	ENST00000466359	MTR	Q99707	1265 aa		6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	C7orf25	Q9BPX7	421 aa		6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	FTHL17	Q9BXU8	183 aa		6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	CELF4	Q9BZC1	486 aa	Known RBP	6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	CHST12	Q9NRB3	414 aa		6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	OLFML3	Q9NRN5	406 aa		6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	RNF216	Q9NWF9	866 aa	Predicted RBP	6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	LARS	Q9P2J5	1176 aa	Known RBP	6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	SUCLA2	Q9P2R7	463 aa	Predicted RBP	6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	PRKAG2	Q9UGJ0	569 aa		6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	SEPT9	Q9UHD8	586 aa	Predicted RBP	6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	ATP11B	Q9Y2G3	1177 aa		6.57	□□□□□ -1.36
NFX1-205	ENST00000466359	KIAA1217	Q5T5P2	1943 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359		A0A087X0B3	334 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	ABHD14A-ACY1	A0A1B0GW23	586 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	GOLGA6L4	A6NEF3	574 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359		E9PMD0	336 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359		M0QZ92	97 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	GPR182	O15218	404 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	POLR2D	O15514	142 aa	Known RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	ACTN4	O43707	911 aa	Known RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	BAIAP3	O94812	1187 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	ZNF202	O95125	648 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	PLS3	P13797	630 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	DARS	P14868	501 aa	Known RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	RAG1	P15918	1043 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	PFKFB1	P16118	471 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	GAP43	P17677	238 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	NCL	P19338	710 aa	Known RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	AXL	P30530	894 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	THPO	P40225	353 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	STAT6	P42226	847 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	SYK	P43405	635 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	NAMPT	P43490	491 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	GPC3	P51654	580 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	PTEN	P60484	403 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	MRPS6	P82932	125 aa	Known RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	MDM2	Q00987	491 aa	Predicted RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	POU5F1	Q01860	360 aa	Known RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	EHHADH	Q08426	723 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	LAMTOR4	Q0VGL1	99 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	MAPK7	Q13164	816 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	PPIG	Q13427	754 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	GIT2	Q14161	759 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	TFDP1	Q14186	410 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	MTERF2	Q49AM1	385 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	PLEKHG4	Q58EX7	1191 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	FAM47C	Q5HY64	1035 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	FBXO47	Q5MNV8	452 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	ZNF618	Q5T7W0	954 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	NT5DC1	Q5TFE4	455 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	RASIP1	Q5U651	963 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	PPP4R3CP	Q6ZMV5	832 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	RUFY4	Q6ZNE9	571 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	TSHZ1	Q6ZSZ6	1077 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	LRRC8D	Q7L1W4	858 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	DAW1	Q8N136	415 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	METTL13	Q8N6R0	699 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	LRRC15	Q8TF66	581 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	DNAJB3	Q8WWF6	145 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	DPF3	Q92784	378 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	DNAJC19	Q96DA6	116 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	VWCE	Q96DN2	955 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	CCDC51	Q96ER9	411 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	CCDC43	Q96MW1	224 aa	Known RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	GDF15	Q99988	308 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	STRA6	Q9BX79	667 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	GCOM2	Q9BZD3	368 aa	Predicted RBP	6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	TRIM9	Q9C026	710 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	C2orf40	Q9H1Z8	148 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	PRO3102	Q9H379	93 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	FZD8	Q9H461	694 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	TMEM134	Q9H6X4	195 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	IFT122	Q9HBG6	1241 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	ARHGAP28	Q9P2N2	729 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	COL4A3BP	Q9Y5P4	624 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	TRPV2	Q9Y5S1	764 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	CEP290	O15078	2479 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	MYH7B	A7E2Y1	1941 aa		6.56	□□□□□ -1.36
NFX1-205	ENST00000466359	MCM3AP	O60318	1980 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	LAMA2	P24043	3122 aa	Known RBP	6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	GOLGA6L22	H0YM25	854 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	ZNF623	O75123	536 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	PTMS	P20962	102 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	GLRA2	P23416	452 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	ITGB8	P26012	769 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	NDUFA8	P51970	172 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	SMTN	P53814	917 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	NLRP11	P59045	1033 aa	Known RBP	6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	SNRPF	P62306	86 aa	Known RBP	6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	IGBP1	P78318	339 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	FAM189B	P81408	668 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	PSMD2	Q13200	908 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	DMP1	Q13316	513 aa	Predicted RBP	6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	ALCAM	Q13740	583 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	MBTPS1	Q14703	1052 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	LONRF3	Q496Y0	759 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	COBLL1	Q53SF7	1204 aa		6.55	□□□□□ -1.36
NFX1-205	ENST00000466359	SPECC1	Q5M775	1068 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms