RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 SCUBE1Q8IWY4 988 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 SCYL1Q96KG9 808 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 KCNJ15Q99712 375 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 TTPALQ9BTX7 342 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 PDGFDQ9GZP0 370 aaPredicted RBP4.44□□□□□ -1.7
CD55-207ENST00000465534 PLA2G3Q9NZ20 509 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 PUF60Q9UHX1 559 aaKnown RBP4.44□□□□□ -1.7
CD55-207ENST00000465534 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.44□□□□□ -1.7
CD55-207ENST00000465534 IQGAP2Q13576 1575 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 MROH1Q8NDA8 1641 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 IL12RB1P42701 662 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 ETV4P43268 484 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 HNRNPMP52272 730 aaKnown RBP eCLIP4.43□□□□□ -1.71e-6■■■■□ 22.2
CD55-207ENST00000465534 NFYCQ13952 458 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 LARP1BQ659C4 914 aaKnown RBP4.43□□□□□ -1.7
CD55-207ENST00000465534 SGMS1Q86VZ5 419 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 KCTD13Q8WZ19 329 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 CFHR4Q92496 578 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 NAF1Q96HR8 494 aaKnown RBP4.43□□□□□ -1.7
CD55-207ENST00000465534 PRRX2Q99811 253 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 PHF20Q9BVI0 1012 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 KIAA1683Q9H0B3 1180 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 AURKAIP1Q9NWT8 199 aaPredicted RBP4.43□□□□□ -1.7
CD55-207ENST00000465534 DSEQ9UL01 958 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 MARF1Q9Y4F3 1742 aaKnown RBP4.43□□□□□ -1.7
CD55-207ENST00000465534 NKTRP30414 1462 aaKnown RBP4.43□□□□□ -1.7
CD55-207ENST00000465534 ABCA3Q99758 1704 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 AGRPO00253 132 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 DDAH1O94760 285 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 CAPNS1P04632 268 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 CENPBP07199 599 aaPredicted RBP4.43□□□□□ -1.7
CD55-207ENST00000465534 PDE6AP16499 860 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 GRK2P25098 689 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 GRK3P35626 688 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 MAP4K2Q12851 820 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 WDR72Q3MJ13 1102 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 Q6ZPA2 131 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 USP53Q70EK8 1073 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 KCTD1Q719H9 257 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 LARP4Q71RC2 724 aaKnown RBP eCLIP4.43□□□□□ -1.7
CD55-207ENST00000465534 ULK2Q8IYT8 1036 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 MICAL1Q8TDZ2 1067 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 PODXL2Q9NZ53 605 aa4.43□□□□□ -1.7
CD55-207ENST00000465534 SCAPERQ9BY12 1400 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 ABCA6Q8N139 1617 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 SMAD7O15105 426 aaKnown RBP4.42□□□□□ -1.7
CD55-207ENST00000465534 RECKO95980 971 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 HMGCRP04035 888 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 BMP5P22003 454 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 KCNQ1P51787 676 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 EPHA5P54756 1037 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 HHEXQ03014 270 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 COL10A1Q03692 680 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 DBPQ10586 325 aaPredicted RBP4.42□□□□□ -1.7
CD55-207ENST00000465534 MRM1Q6IN84 353 aaKnown RBP4.42□□□□□ -1.7
CD55-207ENST00000465534 ZDHHC5Q9C0B5 715 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 PARPBPQ9NWS1 579 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 ACTR10Q9NZ32 417 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 HECAQ9UBI9 543 aaPredicted RBP4.42□□□□□ -1.7
CD55-207ENST00000465534 GIT1Q9Y2X7 761 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 SAMD9LQ8IVG5 1584 aa4.42□□□□□ -1.7
CD55-207ENST00000465534 CAPN14A8MX76 684 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 HSPA8P11142 646 aaKnown RBP4.41□□□□□ -1.7
CD55-207ENST00000465534 ADCY8P40145 1251 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 PPP2R2AP63151 447 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 GRM7Q14831 915 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 LBX2Q6XYB7 198 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 USP30Q70CQ3 517 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 NT5DC4Q86YG4 428 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 TMPRSS6Q8IU80 811 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 GPR135Q8IZ08 494 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 D2HGDHQ8N465 521 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 USP32Q8NFA0 1604 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 TMEM176AQ96HP8 235 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 IER2Q9BTL4 223 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 CD244Q9BZW8 370 aa4.41□□□□□ -1.7
CD55-207ENST00000465534 ZNF518AQ6AHZ1 1483 aa4.4□□□□□ -1.7
CD55-207ENST00000465534 TNRQ92752 1358 aa4.4□□□□□ -1.7
CD55-207ENST00000465534 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.4□□□□□ -1.71
CD55-207ENST00000465534 DLX3O60479 287 aa4.4□□□□□ -1.71
CD55-207ENST00000465534 SOX10P56693 466 aa4.4□□□□□ -1.71
CD55-207ENST00000465534 KIZQ2M2Z5 673 aa4.4□□□□□ -1.71
CD55-207ENST00000465534 RSPO2Q6UXX9 243 aaPredicted RBP4.4□□□□□ -1.71
CD55-207ENST00000465534 P2RX7Q99572 595 aaKnown RBP4.4□□□□□ -1.71
CD55-207ENST00000465534 MTFR1LQ9H019 292 aa4.4□□□□□ -1.71
CD55-207ENST00000465534 ARHGAP28Q9P2N2 729 aa4.4□□□□□ -1.71
CD55-207ENST00000465534 CDC42EP3Q9UKI2 254 aa4.4□□□□□ -1.71
CD55-207ENST00000465534 MRVI1Q9Y6F6 885 aa4.4□□□□□ -1.71
CD55-207ENST00000465534 TMEM131LA2VDJ0 1609 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 NLRP1Q9C000 1473 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 PLCH2O75038 1416 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 WRNQ14191 1432 aaPredicted RBP eCLIP4.39□□□□□ -1.71
CD55-207ENST00000465534 FMN1Q68DA7 1419 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 ATXN1P54253 815 aaKnown RBP4.39□□□□□ -1.71
CD55-207ENST00000465534 IL13RA1P78552 427 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 CRHR2Q13324 411 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 RRP1BQ14684 758 aaKnown RBP4.39□□□□□ -1.71
CD55-207ENST00000465534 CSRP2Q16527 193 aa4.39□□□□□ -1.71
CD55-207ENST00000465534 TNNI3KQ59H18 835 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms