RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CLRN2A0PK11 232 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 A6NNZ2 444 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 VIL1P09327 827 aaKnown RBP19.93■□□□□ 0.78
SYNE4-204ENST00000465425 NPEPPSP55786 919 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 DRAP1Q14919 205 aaPredicted RBP19.93■□□□□ 0.78
SYNE4-204ENST00000465425 ZYXQ15942 572 aaKnown RBP19.93■□□□□ 0.78
SYNE4-204ENST00000465425 TUBB8Q3ZCM7 444 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 KCTD16Q68DU8 428 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 GLYCTKQ8IVS8 523 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 LXNQ9BS40 222 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 ISCUQ9H1K1 167 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 UNC45AQ9H3U1 944 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 SUCLA2Q9P2R7 463 aaPredicted RBP19.93■□□□□ 0.78
SYNE4-204ENST00000465425 BRWD3Q6RI45 1802 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 SLX4Q8IY92 1834 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 ARHGEF35A5YM69 484 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 KRIT1O00522 736 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 TRIM66O15016 1216 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 GALCP54803 685 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 CUL1Q13616 776 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 PPP2R5AQ15172 486 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 TRADDQ15628 312 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 FIZ1Q96SL8 496 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 ZBTB21Q9ULJ3 1066 aa19.93■□□□□ 0.78
SYNE4-204ENST00000465425 CCDC188H7C350 402 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 SART1O43290 800 aaKnown RBP19.92■□□□□ 0.78
SYNE4-204ENST00000465425 EXOC3O60645 756 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 TRIM49P0CI25 452 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 TRIM49CP0CI26 452 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 CBWD6Q4V339 395 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 CBWD3Q5JTY5 395 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 CBWD5Q5RIA9 395 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 SLFN11Q7Z7L1 901 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 EIF1ADQ8N9N8 165 aaKnown RBP19.92■□□□□ 0.78
SYNE4-204ENST00000465425 SUPT20HQ8NEM7 779 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 LNX1Q8TBB1 728 aaPredicted RBP19.92■□□□□ 0.78
SYNE4-204ENST00000465425 CTNNBL1Q8WYA6 563 aaPredicted RBP19.92■□□□□ 0.78
SYNE4-204ENST00000465425 WRAP73Q9P2S5 460 aaPredicted RBP19.92■□□□□ 0.78
SYNE4-204ENST00000465425 SMCHD1A6NHR9 2005 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 ZNF233A6NK53 670 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 IPO5O00410 1097 aaKnown RBP19.92■□□□□ 0.78
SYNE4-204ENST00000465425 EIF3HO15372 352 aaKnown RBP eCLIP19.92■□□□□ 0.78
SYNE4-204ENST00000465425 ARP10275 920 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 MYL7Q01449 175 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 BCAS4Q8TDM0 211 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 APEX2Q9UBZ4 518 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 AMFRQ9UKV5 643 aa19.92■□□□□ 0.78
SYNE4-204ENST00000465425 SPDYE2BA6NHP3 402 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 YDJCA8MPS7 323 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 SPDYE6P0CI01 402 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 ERVK-9P63128 1117 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 NT5DC3Q86UY8 548 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 BANK1Q8NDB2 785 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 INTS2Q9H0H0 1204 aaKnown RBP19.91■□□□□ 0.78
SYNE4-204ENST00000465425 DDX47Q9H0S4 455 aaKnown RBP19.91■□□□□ 0.78
SYNE4-204ENST00000465425 SEPT11Q9NVA2 429 aaKnown RBP19.91■□□□□ 0.78
SYNE4-204ENST00000465425 ABCB4P21439 1286 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 GUCY2CP25092 1073 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 SKOR1P84550 965 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 TTC19Q6DKK2 380 aaPredicted RBP19.91■□□□□ 0.78
SYNE4-204ENST00000465425 MAATS1Q7Z4T9 603 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 FAM160B2Q86V87 743 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 CD302Q8IX05 232 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 SH2D3CQ8N5H7 860 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 RDH13Q8NBN7 331 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 SLC30A5Q8TAD4 765 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 FAM151AQ8WW52 585 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 RFFLQ8WZ73 363 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 VCPKMTQ9H867 229 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 DMAC2Q9NW81 257 aa19.91■□□□□ 0.78
SYNE4-204ENST00000465425 GOLGA6L10A6NI86 522 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 HIP1RO75146 1068 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 BFSP1Q12934 665 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 SLC35G2Q8TBE7 412 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 OSGEPQ9NPF4 335 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 STXBP5LQ9Y2K9 1186 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 DDX39AO00148 427 aaKnown RBP19.9■□□□□ 0.78
SYNE4-204ENST00000465425 TMEM253P0C7T8 217 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 KRT13P13646 458 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 HSPA9P38646 679 aaKnown RBP19.9■□□□□ 0.78
SYNE4-204ENST00000465425 PLS1Q14651 629 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 DLGAP5Q15398 846 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 ARHGAP44Q17R89 818 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 LDHDQ86WU2 507 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 RASGEF1CQ8N431 466 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 CCDC26Q8TAB7 109 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 PIK3R5Q8WYR1 880 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 HES6Q96HZ4 224 aa19.9■□□□□ 0.78
SYNE4-204ENST00000465425 ZNF646O15015 1829 aaPredicted RBP19.9■□□□□ 0.78
SYNE4-204ENST00000465425 GRIN2DO15399 1336 aa19.89■□□□□ 0.78
SYNE4-204ENST00000465425 K7ENM7 598 aa19.89■□□□□ 0.77
SYNE4-204ENST00000465425 CCT5P48643 541 aa19.89■□□□□ 0.77
SYNE4-204ENST00000465425 OGFOD1Q8N543 542 aa19.89■□□□□ 0.77
SYNE4-204ENST00000465425 LRRC45Q96CN5 670 aa19.89■□□□□ 0.77
SYNE4-204ENST00000465425 RIT2Q99578 217 aa19.89■□□□□ 0.77
SYNE4-204ENST00000465425 PLAAQ9Y263 795 aa19.89■□□□□ 0.77
SYNE4-204ENST00000465425 DAAM1Q9Y4D1 1078 aa19.89■□□□□ 0.77
SYNE4-204ENST00000465425 EBAG9O00559 213 aa19.88■□□□□ 0.77
SYNE4-204ENST00000465425 BUB1BO60566 1050 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-204ENST00000465425 ZBTB48P10074 688 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms