RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 CCNB1P14635 433 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 PLCG1P19174 1290 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 ATP6V1C1P21283 382 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 ALDH3A1P30838 453 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 MXRA7P84157 204 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 KLHL30Q0D2K2 578 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 DYNC1I2Q13409 638 aaKnown RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 PUM3Q15397 648 aaKnown RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 FAM43BQ6ZT52 329 aaPredicted RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 TMC4Q7Z404 712 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 METTL13Q8N6R0 699 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 KIAA0895Q8NCT3 520 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 NAP1L3Q99457 506 aaPredicted RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 PRMT1Q99873 361 aaKnown RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 INTUQ9ULD6 942 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 PACSIN2Q9UNF0 486 aaPredicted RBP12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 STXBP5LQ9Y2K9 1186 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 ATP8A1Q9Y2Q0 1164 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 A0A087X0T9 212 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 CCDC194A0A1B0GVG4 234 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 DPPA5A6NC42 116 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 PDLIM1O00151 329 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 FAM228BP0C875 321 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 FCER1AP12319 257 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 NPR1P16066 1061 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 FGFR2P21802 821 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 CALB2P22676 271 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 DNA2P51530 1060 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 CNGA2Q16280 664 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 ASIC2Q16515 512 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 TEKT4Q8WW24 435 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 GRAMD1AQ96CP6 724 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 VCXQ9H320 206 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 PARP2Q9UGN5 583 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 AMACRQ9UHK6 382 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 SH3BP1Q9Y3L3 701 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 MYH2Q9UKX2 1941 aa12.48□□□□□ -0.41
TNRC6A-205ENST00000464539 FLT1P17948 1338 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 TTI1O43156 1089 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 AOC2O75106 756 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 NOL4O94818 638 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 ACADSP16219 412 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 ORC2Q13416 577 aaPredicted RBP12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 DHX34Q14147 1143 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 PDIA5Q14554 519 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 PLS1Q14651 629 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 ZC3H12AQ5D1E8 599 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 RNF43Q68DV7 783 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 ANO7Q6IWH7 933 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 MFSD5Q6N075 450 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 SV2BQ7L1I2 683 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 EEF2KMTQ96G04 330 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 AP1M1Q9BXS5 423 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 RNPEPL1Q9HAU8 725 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 MROH5Q6ZUA9 1318 aa12.47□□□□□ -0.41
TNRC6A-205ENST00000464539 M0R2N6 131 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 LMNAP02545 664 aaKnown RBP12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 SLC5A1P13866 664 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 NT5C2P49902 561 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 MARSP56192 900 aaKnown RBP12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 FKBP3Q00688 224 aaKnown RBP12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 ACVR2BQ13705 512 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 TSNAXIP1Q2TAA8 658 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 CST9Q5W186 159 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 LRRC55Q6ZSA7 311 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 PEX26Q7Z412 305 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 AGGF1Q8N302 714 aaeCLIP12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 TPCN2Q8NHX9 752 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 JDP2Q8WYK2 163 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 CALML4Q96GE6 196 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 HHIPL1Q96JK4 782 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 CEP63Q96MT8 703 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 TRAPPC9Q96Q05 1148 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 TMEM237Q96Q45 408 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 ERP44Q9BS26 406 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 EPB41L4BQ9H329 900 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 NLRC4Q9NPP4 1024 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 ZDHHC18Q9NUE0 388 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 TXLNGQ9NUQ3 528 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 IRAK4Q9NWZ3 460 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 WDR35Q9P2L0 1181 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 STK17AQ9UEE5 414 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 PRKAG3Q9UGI9 489 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 ADAMTS1Q9UHI8 967 aa12.46□□□□□ -0.41
TNRC6A-205ENST00000464539 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms