RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 PA2G4Q9UQ80 394 aaKnown RBP6.65□□□□□ -1.34
CD46-211ENST00000464082 AK5Q9Y6K8 562 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 MROH5Q6ZUA9 1318 aa6.65□□□□□ -1.35
CD46-211ENST00000464082 KIF16BQ96L93 1317 aa6.65□□□□□ -1.35
CD46-211ENST00000464082 UBTFL1P0CB47 393 aaPredicted RBP6.64□□□□□ -1.35
CD46-211ENST00000464082 HSPA8P11142 646 aaKnown RBP6.64□□□□□ -1.35
CD46-211ENST00000464082 HIBADHP31937 336 aaKnown RBP6.64□□□□□ -1.35
CD46-211ENST00000464082 HMGA2P52926 109 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 MTX1Q13505 466 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 METTL24Q5JXM2 366 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 PRAMEF18Q5VWM3 479 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 MOB2Q70IA6 237 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 ZNF804AQ7Z570 1209 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 CCDC84Q86UT8 332 aaPredicted RBP6.64□□□□□ -1.35
CD46-211ENST00000464082 TMEM57Q8N5G2 664 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 TMEM52Q8NDY8 209 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 GATAD2BQ8WXI9 593 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 DCPSQ96C86 337 aaKnown RBP6.64□□□□□ -1.35
CD46-211ENST00000464082 PRMT6Q96LA8 375 aaPredicted RBP6.64□□□□□ -1.35
CD46-211ENST00000464082 JMJD8Q96S16 334 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 GBA2Q9HCG7 927 aaPredicted RBP6.64□□□□□ -1.35
CD46-211ENST00000464082 COPRSQ9NQ92 184 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 PMF1-BGLAPU3KQ54 211 aa6.64□□□□□ -1.35
CD46-211ENST00000464082 PNMA6EA0A0J9YXQ4 647 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
CD46-211ENST00000464082 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 SH3D21A4FU49 640 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 ZSWIM8A7E2V4 1837 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 C1QTNF3-AMACRE9PGA6 284 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 CIAO1O76071 339 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 MYH1P12882 1939 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 HUNKP57058 714 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 RNF4P78317 190 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 CAMK2GQ13555 558 aaPredicted RBP6.63□□□□□ -1.35
CD46-211ENST00000464082 CFAP100Q494V2 611 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 MFSD14BQ5SR56 506 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 CPZQ66K79 652 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 CDADC1Q9BWV3 514 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 LNPKQ9C0E8 428 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 FZD1Q9UP38 647 aa6.63□□□□□ -1.35
CD46-211ENST00000464082 DOCK3Q8IZD9 2030 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 F8W031 263 aaPredicted RBP6.62□□□□□ -1.35
CD46-211ENST00000464082 MEIS1O00470 390 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 SIGLEC6O43699 453 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 PF4P02776 101 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 SLPIP03973 132 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 ZNF20P17024 532 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 ADORA1P30542 326 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 MAP2K2P36507 400 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 ECE1P42892 770 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 MMP14P50281 582 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 MVKQ03426 396 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 NR1I3Q14994 352 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 PUM3Q15397 648 aaKnown RBP6.62□□□□□ -1.35
CD46-211ENST00000464082 TARBP2Q15633 366 aaKnown RBP6.62□□□□□ -1.35
CD46-211ENST00000464082 RGMBQ6NW40 437 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 RASAL3Q86YV0 1011 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 C8orf49Q96NF6 230 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 MENTQ9BUN1 341 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 SIL1Q9H173 461 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 MGAMO43451 1857 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 DOCK1Q14185 1865 aa6.62□□□□□ -1.35
CD46-211ENST00000464082 CLRN2A0PK11 232 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 GNAI3P08754 354 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 MC3RP41968 323 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 CTSKP43235 329 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 PHKA1P46020 1223 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 LBX1P52954 281 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 ARSHQ5FYA8 562 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 ZKSCAN2Q63HK3 967 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 APOBEC3FQ8IUX4 373 aaKnown RBP6.61□□□□□ -1.35
CD46-211ENST00000464082 C2orf69Q8N8R5 385 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 LPIN2Q92539 896 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 FRAT1Q92837 279 aaPredicted RBP6.61□□□□□ -1.35
CD46-211ENST00000464082 ZNF512BQ96KM6 892 aaPredicted RBP6.61□□□□□ -1.35
CD46-211ENST00000464082 AP5S1Q9NUS5 200 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 HDAC9Q9UKV0 1011 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 HTTP42858 3142 aa6.61□□□□□ -1.35
CD46-211ENST00000464082 DDX60LQ5H9U9 1706 aaKnown RBP6.61□□□□□ -1.35
CD46-211ENST00000464082 MYH8P13535 1937 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 RFX7Q2KHR2 1363 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 UBE2Q2LH0YL09 131 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 IPO8O15397 1037 aaKnown RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 SRGAP3O43295 1099 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 ZNF205O95201 554 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 C6P13671 934 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 IL15P40933 162 aaPredicted RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 CRKP46108 304 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 CTCFP49711 727 aaPredicted RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 FKBP1BP68106 108 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 MAP2K1Q02750 393 aaPredicted RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 CHAF1AQ13111 956 aaPredicted RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 NOGQ13253 232 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 GRM1Q13255 1194 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 DLGAP5Q15398 846 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 ATP2B3Q16720 1220 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 APOBEC3HQ6NTF7 200 aaKnown RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 CARFQ8N187 725 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms