RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NME8Q8N427 588 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 ATP8B4Q8TF62 1192 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 SUSD6Q92537 303 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 AIFM3Q96NN9 605 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 ZMYND12Q9H0C1 365 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 CWH43Q9H720 699 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 RGS18Q9NS28 235 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 RNF19AQ9NV58 838 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 VPS54Q9P1Q0 977 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 PTPRZ1P23471 2315 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 TMEM221A6NGB7 291 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 M0R296 226 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 DDX39AO00148 427 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 EDIL3O43854 480 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 HBP1O60381 514 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 EIF5BO60841 1220 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 RPS6KA5O75582 802 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 FOSP01100 380 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 RBM25P49756 843 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 ERVFC1P60507 584 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 UBE3AQ05086 875 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 NFX1Q12986 1120 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 AP3B2Q13367 1082 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 DSC3Q14574 896 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 ME3Q16798 604 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 DUSP6Q16828 381 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 NIPA1Q7RTP0 329 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 LINC01465Q8N7H1 131 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 COLGALT1Q8NBJ5 622 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 RASGRP4Q8TDF6 673 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 GTF3C6Q969F1 213 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 PPP2R3CQ969Q6 453 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 MFSD14AQ96MC6 490 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 PPP1R16BQ96T49 567 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 OSMRQ99650 979 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 ADAM2Q99965 735 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 TLR9Q9NR96 1032 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 ST3GAL5Q9UNP4 418 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 STK36Q9NRP7 1315 aa8.98□□□□□ -0.97
CDC42BPA-210ENST00000462553 DNAH14Q0VDD8 3507 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 CACNA1AO00555 2505 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 DOCK8Q8NF50 2099 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 TBKBP1A7MCY6 615 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 M0R2N6 131 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 PER2O15055 1255 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 GPR32O75388 356 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 FGF18O76093 207 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 DEXIO95424 95 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 FGFR1P11362 822 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 ATF7P17544 494 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 IBSPP21815 317 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 NEK4P51957 841 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 EMP3P54852 163 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 ZXDAP98168 799 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 SSRP1Q08945 709 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 TCF15Q12870 199 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 GSE1Q14687 1217 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 ANKRD1Q15327 319 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 KIZQ2M2Z5 673 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 JAKMIP3Q5VZ66 844 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 LRRC55Q6ZSA7 311 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 SLC24A5Q71RS6 500 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 NECAB1Q8N987 351 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 TNPO1Q92973 898 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 ASIC4Q96FT7 647 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 PHF7Q9BWX1 381 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 SLKQ9H2G2 1235 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 TLE6Q9H808 572 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 ZNF302Q9NR11 478 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 C1orf112Q9NSG2 853 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 TYW1Q9NV66 732 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 LRFN2Q9ULH4 789 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 GINS2Q9Y248 185 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 PCDHB7Q9Y5E2 793 aa8.97□□□□□ -0.97
CDC42BPA-210ENST00000462553 DENND3A2RUS2 1198 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 IPO5O00410 1097 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 BACH1O14867 736 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 VTNP04004 478 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 CYP3A4P08684 503 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 FDPSP14324 419 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 PBX3P40426 434 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 CLCN3P51790 818 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 FAM189BP81408 668 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 AKAP17AQ02040 695 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 ZNF484Q5JVG2 852 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 FAM160B1Q5W0V3 765 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 SWSAP1Q6NVH7 229 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 PDXDC2PQ6P474 469 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 SYCE2Q6PIF2 218 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 TMEM184AQ6ZMB5 413 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 FAM43BQ6ZT52 329 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 PLA2G4DQ86XP0 818 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 REXO1Q8N1G1 1221 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 NSUN7Q8NE18 718 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 CCDC148Q8NFR7 591 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 CCDC12Q8WUD4 166 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 LENG9Q96B70 501 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 CASD1Q96PB1 797 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 CDCA3Q99618 268 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms