RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SPG21Q9NZD8 308 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 CDH22Q9UJ99 828 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
CBX3-205ENST00000462165 HCFC2Q9Y5Z7 792 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 PRR23AA6NEV1 266 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 C2orf71A6NGG8 1288 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 SLC27A2O14975 620 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 ZSCAN20P17040 1043 aaPredicted RBP12.32□□□□□ -0.44
CBX3-205ENST00000462165 PBX3P40426 434 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 MTHFRP42898 656 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 ASCL5Q7RTU5 278 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 PLA2G4DQ86XP0 818 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 ECHDC2Q86YB7 292 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 ABI1Q8IZP0 508 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 ZNF710Q8N1W2 664 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 METTL13Q8N6R0 699 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 TMEM105Q8N8V8 129 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 MRPL43Q8N983 215 aaKnown RBP12.32□□□□□ -0.44
CBX3-205ENST00000462165 LRRC2Q9BYS8 371 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
CBX3-205ENST00000462165 GLT8D2Q9H1C3 349 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 CEP131Q9UPN4 1083 aa12.32□□□□□ -0.44
CBX3-205ENST00000462165 PTPRZ1P23471 2315 aaPredicted RBP12.32□□□□□ -0.44
CBX3-205ENST00000462165 IGLV3-22A0A075B6J6 115 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 SMCO2A6NFE2 343 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 IPO5O00410 1097 aaKnown RBP12.31□□□□□ -0.44
CBX3-205ENST00000462165 MAGEB2O15479 319 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
CBX3-205ENST00000462165 NLRP11P59045 1033 aaKnown RBP12.31□□□□□ -0.44
CBX3-205ENST00000462165 FUT2Q10981 343 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 NECTIN1Q15223 517 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 CLLU1OSQ5K130 101 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 ZNF746Q6NUN9 644 aaPredicted RBP12.31□□□□□ -0.44
CBX3-205ENST00000462165 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 CKAP2LQ8IYA6 745 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 LINC01465Q8N7H1 131 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 CRYGNQ8WXF5 182 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 ADAMTS10Q9H324 1103 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 BARHL2Q9NY43 387 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 FRYLO94915 3013 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 DMXL1Q9Y485 3027 aa12.31□□□□□ -0.44
CBX3-205ENST00000462165 FAM186AA6NE01 2351 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 A0A0U1RQF3 1178 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 EOMESO95936 686 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 CYP3A4P08684 503 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 EIF4BP23588 611 aaKnown RBP12.3□□□□□ -0.44
CBX3-205ENST00000462165 TMOD1P28289 359 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 CLCN3P51790 818 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 CREB3L3Q68CJ9 461 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
CBX3-205ENST00000462165 KIAA1841Q6NSI8 718 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 APOA5Q6Q788 366 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 ZNF598Q86UK7 904 aaKnown RBP12.3□□□□□ -0.44
CBX3-205ENST00000462165 SMAP1Q8IYB5 467 aaPredicted RBP12.3□□□□□ -0.44
CBX3-205ENST00000462165 MAP7D2Q96T17 732 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 ZNF577Q9BSK1 485 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 SMOC2Q9H3U7 446 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 AKT3Q9Y243 479 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 USTQ9Y2C2 406 aa12.3□□□□□ -0.44
CBX3-205ENST00000462165 RIF1Q5UIP0 2472 aaKnown RBP12.3□□□□□ -0.44
CBX3-205ENST00000462165 CXCL14O95715 111 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 ASGR2P07307 311 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 PSAPP07602 524 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 CLCN5P51795 746 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 SETQ01105 290 aaPredicted RBP12.29□□□□□ -0.44
CBX3-205ENST00000462165 BMS1Q14692 1282 aaKnown RBP12.29□□□□□ -0.44
CBX3-205ENST00000462165 RTN1Q16799 776 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 RARS2Q5T160 578 aaKnown RBP12.29□□□□□ -0.44
CBX3-205ENST00000462165 MCTP2Q6DN12 878 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 EFCAB12Q6NXP0 572 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 TRMT1LQ7Z2T5 733 aaKnown RBP12.29□□□□□ -0.44
CBX3-205ENST00000462165 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 TDRD5Q8NAT2 981 aaKnown RBP12.29□□□□□ -0.44
CBX3-205ENST00000462165 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 FAM167AQ96KS9 214 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 MRPL9Q9BYD2 267 aaKnown RBP12.29□□□□□ -0.44
CBX3-205ENST00000462165 DZANK1Q9NVP4 752 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 PCDHA10Q9Y5I2 948 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 IRAK3Q9Y616 596 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
CBX3-205ENST00000462165 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
CBX3-205ENST00000462165 CARNS1A5YM72 827 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 NT5C1B-RDH14C9J2C7 533 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 WEE2P0C1S8 567 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
CBX3-205ENST00000462165 ALDH7A1P49419 539 aaKnown RBP12.28□□□□□ -0.44
CBX3-205ENST00000462165 METAP2P50579 478 aaKnown RBP eCLIP12.28□□□□□ -0.44
CBX3-205ENST00000462165 GPC3P51654 580 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 BCAR1P56945 870 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 GIT2Q14161 759 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 ATAT1Q5SQI0 421 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 VPS52Q8N1B4 723 aa12.28□□□□□ -0.44
CBX3-205ENST00000462165 LRRC71Q8N4P6 559 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms