RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 PFKFB4Q16877 469 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 SLC35G1Q2M3R5 365 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 PAN2Q504Q3 1202 aaKnown RBP8.41□□□□□ -1.06
LRCH3-210ENST00000461674 RCSD1Q6JBY9 416 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 GGT6Q6P531 493 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 OSTM1Q86WC4 334 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 MSL3Q8N5Y2 521 aaKnown RBP8.41□□□□□ -1.06
LRCH3-210ENST00000461674 ATG16L2Q8NAA4 619 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 RSPH1Q8WYR4 309 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 ZNF496Q96IT1 587 aaPredicted RBP8.41□□□□□ -1.06
LRCH3-210ENST00000461674 NT5C1BQ96P26 610 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 SORBS1Q9BX66 1292 aaKnown RBP8.41□□□□□ -1.06
LRCH3-210ENST00000461674 JMJD4Q9H9V9 463 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 LRFN1Q9P244 771 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 AP4E1Q9UPM8 1137 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 SIK3Q9Y2K2 1263 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 NUB1Q9Y5A7 615 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 NR2E3Q9Y5X4 410 aa8.41□□□□□ -1.06
LRCH3-210ENST00000461674 A0A087X0M5 115 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 A0A1B0GX30 115 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 SYNDIG1LA6NDD5 238 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 CCDC154A6NI56 674 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-210ENST00000461674 ACKR2O00590 384 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PHGDHO43175 533 aaKnown RBP8.4□□□□□ -1.06
LRCH3-210ENST00000461674 HTRA2O43464 458 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PLA2G6O60733 806 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 ADAM11O75078 769 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 MTA2O94776 668 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PRAMEF1O95521 474 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 AMY2AP04746 511 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 HARSP12081 509 aaKnown RBP8.4□□□□□ -1.06
LRCH3-210ENST00000461674 CKMT1AP12532 417 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 ATP1A3P13637 1013 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 KRT15P19012 456 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 AMY2BP19961 511 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 EDNRBP24530 442 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 BCAR1P56945 870 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PRR20EP86478 221 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PRR20CP86479 221 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PRR20DP86480 221 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PRR20BP86481 221 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PRR20AP86496 221 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PTSQ03393 145 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 CACNB2Q08289 660 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-210ENST00000461674 MEA1Q16626 185 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 FBXO47Q5MNV8 452 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 TMCO3Q6UWJ1 677 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 HEATR4Q86WZ0 1026 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 SIAH1Q8IUQ4 282 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 NUDT8Q8WV74 236 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 RTF1Q92541 710 aaKnown RBP8.4□□□□□ -1.06
LRCH3-210ENST00000461674 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 ZMAT2Q96NC0 199 aaKnown RBP8.4□□□□□ -1.06
LRCH3-210ENST00000461674 MIPEPQ99797 713 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 PIDD1Q9HB75 910 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 GPR34Q9UPC5 381 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 LIMCH1Q9UPQ0 1083 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 B3GALT1Q9Y5Z6 326 aa8.4□□□□□ -1.06
LRCH3-210ENST00000461674 A0A1W2PPC4 97 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 HOXC11O43248 304 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 MYO1BO43795 1136 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 PARP1P09874 1014 aaKnown RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 CLEC2LP0C7M8 214 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 OAS2P29728 719 aaKnown RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 CTSKP43235 329 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 NOP2P46087 812 aaKnown RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 EPHA7Q15375 998 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 EEF1DP3Q658K8 133 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 CRTC3Q6UUV7 619 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 CDH24Q86UP0 819 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 SNX32Q86XE0 403 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 NDUFAF2Q8N183 169 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 SIMC1Q8NDZ2 872 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 FCRL3Q96P31 734 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 WNT8AQ9H1J5 351 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 ZMAT3Q9HA38 289 aaKnown RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 SSU72Q9NP77 194 aaKnown RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 OLA1Q9NTK5 396 aaKnown RBP8.39□□□□□ -1.07
LRCH3-210ENST00000461674 IRAK4Q9NWZ3 460 aa8.39□□□□□ -1.07
LRCH3-210ENST00000461674 TRBV23OR9-2A0A075B6M9 112 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 MEIS1O00470 390 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 RNGTTO60942 597 aaKnown RBP8.38□□□□□ -1.07
LRCH3-210ENST00000461674 ZBED4O75132 1171 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 HNRNPCP07910 306 aaKnown RBP eCLIP8.38□□□□□ -1.073e-6■■□□□ 13.9
LRCH3-210ENST00000461674 BMP4P12644 408 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 RXRBP28702 533 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 MAN2A2P49641 1150 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 CLK1P49759 484 aaKnown RBP8.38□□□□□ -1.07
LRCH3-210ENST00000461674 MAP2K6P52564 334 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 ITGA8P53708 1063 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 DUSP4Q13115 394 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 LSAMPQ13449 338 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 PITRM1Q5JRX3 1037 aa8.38□□□□□ -1.07
LRCH3-210ENST00000461674 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-210ENST00000461674 JMJD6Q6NYC1 403 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-210ENST00000461674 CCDC62Q6P9F0 684 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms