RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TCEAL5Q5H9L2 206 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 ODR4Q5SWX8 454 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 JAKMIP3Q5VZ66 844 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 PDXDC2PQ6P474 469 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 MTHFD1LQ6UB35 978 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 ABHD15Q6UXT9 468 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 Q6ZUG5 572 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 NPAS4Q8IUM7 802 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 SMAP1Q8IYB5 467 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-220ENST00000461409 CCDC148Q8NFR7 591 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 TRAPPC12Q8WVT3 735 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 CRYGNQ8WXF5 182 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 BRF1Q92994 677 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 ZNF577Q9BSK1 485 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 RC3H2Q9HBD1 1191 aaKnown RBP9.86□□□□□ -0.83
HDAC9-220ENST00000461409 TBC1D22BQ9NU19 505 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 TCF20Q9UGU0 1960 aaKnown RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 IGLV3-22A0A075B6J6 115 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 FAM187AA6NFU0 413 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 RBAK-RBAKDNI3L0D1 243 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 DDX39AO00148 427 aaKnown RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 PRPF3O43395 683 aaKnown RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 CPA1P15085 419 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 RPS6KB1P23443 525 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 KLRC1P26715 233 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 TMEM62Q0P6H9 643 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 COL19A1Q14993 1142 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 NAALADL2Q58DX5 795 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 ZNF484Q5JVG2 852 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 PTCRAQ6ISU1 281 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 ZNF746Q6NUN9 644 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 CKAP2LQ8IYA6 745 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 CMTR2Q8IYT2 770 aaKnown RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 NEK9Q8TD19 979 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 PPP2R3CQ969Q6 453 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 ZNF689Q96CS4 500 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 ZBTB10Q96DT7 871 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 PABPC5Q96DU9 382 aaKnown RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 CCDC136Q96JN2 1154 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 RNF26Q9BY78 433 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-220ENST00000461409 ZNF302Q9NR11 478 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 PADI3Q9ULW8 664 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 SNX14Q9Y5W7 946 aa9.85□□□□□ -0.83
HDAC9-220ENST00000461409 SPTLC1O15269 473 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 DHX15O43143 795 aaKnown RBP9.84□□□□□ -0.83
HDAC9-220ENST00000461409 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
HDAC9-220ENST00000461409 PSAPP07602 524 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 PRR16Q569H4 304 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 SWSAP1Q6NVH7 229 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 EP400NLQ6ZTU2 488 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 CCDC60Q8IWA6 550 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-220ENST00000461409 FAM178BQ8IXR5 827 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-220ENST00000461409 LINC01599Q8WXQ3 324 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 P2RX5Q93086 422 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 FAM167AQ96KS9 214 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 AGXT2Q9BYV1 514 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 LRFN2Q9ULH4 789 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 CEP131Q9UPN4 1083 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 GINS2Q9Y248 185 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 PCDHA10Q9Y5I2 948 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 RALGAPA2Q2PPJ7 1873 aa9.84□□□□□ -0.83
HDAC9-220ENST00000461409 TTC3P53804 2025 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 DENND3A2RUS2 1198 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 WDR64B1ANS9 1081 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 ZBTB42B2RXF5 422 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 H3BQ06 376 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 GPR182O15218 404 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 GRM6O15303 877 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 ZBTB24O43167 697 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 RPS6KA5O75582 802 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 C22orf31O95567 290 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 MMP1P03956 469 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 LINC00271P0C7V0 271 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 IFNAR1P17181 557 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 CIITAP33076 1130 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 SARSP49591 514 aaKnown RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 CRYBB1P53674 252 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 NFX1Q12986 1120 aaKnown RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 PKN1Q16512 942 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 TMEM31Q5JXX7 168 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 TRIM22Q8IYM9 498 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 KIAA0319LQ8IZA0 1049 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 GJD3Q8N144 294 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 CRIPAKQ8N1N5 446 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 PHKBQ93100 1093 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 SLC26A6Q9BXS9 759 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 SH3GLB2Q9NR46 395 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 C1orf112Q9NSG2 853 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 CLDND1Q9NY35 253 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 SAMM50Q9Y512 469 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 PCDHB7Q9Y5E2 793 aa9.83□□□□□ -0.84
HDAC9-220ENST00000461409 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 MRPL42Q9Y6G3 142 aaKnown RBP9.83□□□□□ -0.84
HDAC9-220ENST00000461409 MAGEB2O15479 319 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 TMOD1P28289 359 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 PDIA3P30101 505 aaKnown RBP9.82□□□□□ -0.84
HDAC9-220ENST00000461409 USP11P51784 963 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 EVCP57679 992 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms