RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 STRBPQ96SI9 672 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 LGR4Q9BXB1 951 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 DNAJC18Q9H819 358 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 SPC25Q9HBM1 224 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 C1GALT1Q9NS00 363 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 ZNF112Q9UJU3 913 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 ANGEL1Q9UNK9 670 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 SIPA1L1O43166 1804 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 FOCADQ5VW36 1801 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 COL2A1P02458 1487 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 MYH7P12883 1935 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 RBAK-RBAKDNI3L0D1 243 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 ETV3P41162 512 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 PPP2R2AP63151 447 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 CDK5R2Q13319 367 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 MAP7Q14244 749 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 YOD1Q5VVQ6 348 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 RGMBQ6NW40 437 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 FAM227BQ96M60 508 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 FSD1Q9BTV5 496 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 ASPNQ9BXN1 380 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 GBP3Q9H0R5 595 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 GP6Q9HCN6 339 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 DCP1AQ9NPI6 582 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 WHRNQ9P202 907 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 SAP30BPQ9UHR5 308 aaKnown RBP9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 PALD1Q9ULE6 856 aa9.55□□□□□ -0.88
ECHDC1-212ENST00000461239 DDX60LQ5H9U9 1706 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 CCDC163A0A0D9SF12 145 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 A0A0D9SFI3 127 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 EOMESO95936 686 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 ZFYP08048 801 aaPredicted RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 CYP2D6P10635 497 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 BMP3P12645 472 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 SDSP20132 328 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 MAP4P27816 1152 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 L1CAMP32004 1257 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 NF2P35240 595 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 GSK3AP49840 483 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 PLCD1P51178 756 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 JAG1P78504 1218 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 SLC4A8Q2Y0W8 1093 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 ZSCAN25Q6NSZ9 544 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 CCDC129Q6ZRS4 1044 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 ARMC9Q7Z3E5 817 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 RASAL3Q86YV0 1011 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 FAM20CQ8IXL6 584 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 LRRN4CLQ8ND94 238 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 ZKSCAN4Q969J2 545 aaPredicted RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 RILPL2Q969X0 211 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 UTP4Q969X6 686 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 CAPNS2Q96L46 248 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 NOL10Q9BSC4 688 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 AARSD1Q9BTE6 412 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 IL25Q9H293 177 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 TMX1Q9H3N1 280 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 COL4A3BPQ9Y5P4 624 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 WDR33Q9C0J8 1336 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
ECHDC1-212ENST00000461239 TRAV20A0A0B4J274 112 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 GPAA1O43292 621 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 TBX1O43435 398 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 MASP1P48740 699 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 NMIQ13287 307 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 VGLL4Q14135 290 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 HSP90AA2PQ14568 343 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 SHROOM1Q2M3G4 852 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 FAM209AQ5JX71 171 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 ZNF589Q86UQ0 364 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 CERS3Q8IU89 383 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 BVESQ8NE79 360 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 SCARF2Q96GP6 870 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 MRGPRX3Q96LB0 322 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 WRNIP1Q96S55 665 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 CRNKL1Q9BZJ0 848 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 CWC22Q9HCG8 908 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 EPB41L4AQ9HCS5 686 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 PLAAQ9Y263 795 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 SLC4A4Q9Y6R1 1079 aa9.53□□□□□ -0.88
ECHDC1-212ENST00000461239 CYP2D7A0A087X1C5 515 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 FAM95CA0A1B0GW59 222 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 PPM1BO75688 479 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 GRIA2P42262 883 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 GABPAQ06546 454 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 KCNMA1Q12791 1236 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 CBX2Q14781 532 aaPredicted RBP9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 VPS53Q5VIR6 699 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 CTR9Q6PD62 1173 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 ADAT2Q7Z6V5 191 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 TOP6BLQ8N6T0 577 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 PPP1R14AQ96A00 147 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 RCC1LQ96I51 464 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 DHRS4Q9BTZ2 278 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 DUSP23Q9BVJ7 150 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 ZNF341Q9BYN7 854 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 DHX36Q9H2U1 1008 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 NCOA5Q9HCD5 579 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms