RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 SDF4Q9BRK5 362 aa16.57■□□□□ 0.24
NCK1-202ENST00000460960 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
NCK1-202ENST00000460960 JADE2Q9NQC1 790 aa16.57■□□□□ 0.24
NCK1-202ENST00000460960 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.57■□□□□ 0.24
NCK1-202ENST00000460960 PCDHA2Q9Y5H9 948 aa16.57■□□□□ 0.24
NCK1-202ENST00000460960 GFRA3O60609 400 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 TDP2O95551 362 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 CYP3A4P08684 503 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 SRGAP2BP0DMP2 458 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 CBX2Q14781 532 aaPredicted RBP16.56■□□□□ 0.24
NCK1-202ENST00000460960 PLPP4Q5VZY2 271 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 LLGL2Q6P1M3 1020 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 CRIPAKQ8N1N5 446 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 ATOH1Q92858 354 aaPredicted RBP16.56■□□□□ 0.24
NCK1-202ENST00000460960 GJA10Q969M2 543 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 LENG9Q96B70 501 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 HCSTQ9UBK5 93 aa16.56■□□□□ 0.24
NCK1-202ENST00000460960 FNDC1Q4ZHG4 1894 aaPredicted RBP16.56■□□□□ 0.24
NCK1-202ENST00000460960 MEIS1O00470 390 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 RPS6KA5O75582 802 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 FGF18O76093 207 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 STAT5BP51692 787 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 ACTR2P61160 394 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 NONOQ15233 471 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■■■■■ 27.1
NCK1-202ENST00000460960 CEP55Q53EZ4 464 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 FAM102BQ5T8I3 360 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 MTHFD1LQ6UB35 978 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 VN1R2Q8NFZ6 395 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 INTS4Q96HW7 963 aaKnown RBP16.55■□□□□ 0.24
NCK1-202ENST00000460960 ADAM2Q99965 735 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
NCK1-202ENST00000460960 CCDC194A0A1B0GVG4 234 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 SMIM35A0A1B0GVV1 85 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 DDX39AO00148 427 aaKnown RBP16.54■□□□□ 0.24
NCK1-202ENST00000460960 BACH1O14867 736 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 MAFGO15525 162 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 SLC37A4O43826 429 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 MGEA5O60502 916 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 CIITAP33076 1130 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 TECP42680 631 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 ERVFC1P60507 584 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 UBE3AQ05086 875 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 ITGB3BPQ13352 177 aaPredicted RBP16.54■□□□□ 0.24
NCK1-202ENST00000460960 DUSP6Q16828 381 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 NME8Q8N427 588 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 COLGALT1Q8NBJ5 622 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 ENTPD7Q9NQZ7 604 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 KCNH7Q9NS40 1196 aa16.54■□□□□ 0.24
NCK1-202ENST00000460960 NOC2LQ9Y3T9 749 aaKnown RBP16.54■□□□□ 0.24
NCK1-202ENST00000460960 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 ATF7P17544 494 aaPredicted RBP16.53■□□□□ 0.24
NCK1-202ENST00000460960 KLRC1P26715 233 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 ZNF76P36508 570 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 PTPN21Q16825 1174 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 PRR16Q569H4 304 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
NCK1-202ENST00000460960 MCTP2Q6DN12 878 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 PLPPR4Q7Z2D5 763 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 CDCA3Q99618 268 aaPredicted RBP16.53■□□□□ 0.24
NCK1-202ENST00000460960 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 AGO4Q9HCK5 861 aaKnown RBP16.53■□□□□ 0.24
NCK1-202ENST00000460960 ERVK-5Q9HDB9 667 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 TYW1Q9NV66 732 aaKnown RBP16.53■□□□□ 0.24
NCK1-202ENST00000460960 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
NCK1-202ENST00000460960 EVPLQ92817 2033 aa16.53■□□□□ 0.24
NCK1-202ENST00000460960 KDM3AQ9Y4C1 1321 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 FGFR1P11362 822 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 AVPR2P30518 371 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 CA8P35219 290 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 USP11P51784 963 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 NBR1Q14596 966 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 ODR4Q5SWX8 454 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 SLC24A5Q71RS6 500 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 TRMT1LQ7Z2T5 733 aaKnown RBP16.52■□□□□ 0.24
NCK1-202ENST00000460960 ATP8B4Q8TF62 1192 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 SUSD6Q92537 303 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 ASIC4Q96FT7 647 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 MBOAT7Q96N66 472 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 TCF25Q9BQ70 676 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 CDHR5Q9HBB8 845 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 BRMS1Q9HCU9 246 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 ST3GAL5Q9UNP4 418 aa16.52■□□□□ 0.24
NCK1-202ENST00000460960 NFASCO94856 1347 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 CYP3A7-CYP3A51PA0A087WV96 503 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 H0Y858 1186 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 MSH4O15457 936 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 DHX15O43143 795 aaKnown RBP16.51■□□□□ 0.23
NCK1-202ENST00000460960 PDGFBP01127 241 aaPredicted RBP16.51■□□□□ 0.23
NCK1-202ENST00000460960 LAG3P18627 525 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 SYT1P21579 422 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 CYP3A7P24462 503 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.23
NCK1-202ENST00000460960 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
NCK1-202ENST00000460960 FAM160B1Q5W0V3 765 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms